Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02986 ATGGCATCTTCGTCTTTGCAACAAGAAAAAGGCAATCATGGTGATGATACTGGAAATATTATGCTGAAAAAAGGAACATGGTCATCTCAAGAGGATCAAGTATTAGTAGAATATGTGAAAAATTATGGAGCTAGAAAGTGGGATTCGGTACGAAAGAAAACAAAACTTGTTCGAGATGGAAAAAGTTGTCGTTTAAGATGGTTAAATCATCTAAAACCAACTTTAAAAAAGTGTTCATTCAATGAAGAAGAAAGGGAGAAACTTATTCGTCTCTATAAAGAATTAGGACCCAAATGGTCTCGCATGGTTTCAAAGTTTCCTGGAAGAACCGATAACGAGTTAAAGAATTTTATTAATTCAAGAAAAAGAAGTTTAAAAAATTCTAGAAAGAACCTAGCTCGAGAAAGCATAAACCATGTTGATGAGTTGAATGATAATGTTGGAGAAATTAGATTGAAGAAGGGTTCTAGTAACCAAAATAATAATGCCTTCGAAGAAGAAGAAGAAATGACTCTACCAAGAGTGGAATTTGATCATCAAAACATTATGCACGCAAACTATCTTAATCAAATTTATGATGAAGCAAATATAAATTTTAAACCACTTTCAACATTGATTGATGATTCAAATATGCTATACAATAATGTGGGAAGCTTTTCTTTAAGCAATTCTAGAGAGTTCCTGATTCCCAAAAGTATAAACCTTGTTGATGAGTTGATTGATGATATTGAAAGGCTTAGTATGATGAAGGGTTCTAGTAACCAAAATAATATTGTCTTTGAAGAAGAAGAAATGACTCTACCAAGAATGGAATTTGATGATCAAGATATTTTGTATGCAAACTATCTTGATCCAATTTATGAGGAGGCAAATATCAATTTTGAACCATTTTCAACCTTGGTTGATGATTCAAATATGCAATACAATAAAATGGGAAGCTTTTCTTTAAGCAATTCTAGAGAGTTCCTCATTCCCAAAAGCATAAACAATGTTGATGAATTGATTGCTAGTGTTGAAGAATTTAGTATGATGAAGGATTCTAGTAACCAAAATAATAATGCCTCCGAAGAAGAAATGACTTTACCAAGAGTGGAATCCAATCATCAAGACATTATGCATGCAAACTATCTTGAGGAAAATATCAACTTCGAACAACTTTCAAGGTTGGTTAATGATTCAAATATGTTATACAATAATGTGGAAAGTTCTTCTTTAAGCAATCATATTGTCCCAACATTGAATGATAGGTTTTCTACACACCCAGAATGTTTGTACTTTCAAGATGAGGAAAATATCAACAACCTTGAACCACTTTCAAAGTTGGATGATGATTTAAATATGCCATATAATAATGTGGAAAATACTTCTTTGTCTGTGGTACCGGATCTTCTTACATTCCCGGAAAATACTTCTTTATCCATGGTACCGGATCTTCTCACATTCCCAGAATGTTCTCACACTCAAGATAGGGAAGATACACTTCCATCATTTCCATCATGTAATATGGTTTTCGATCAAGATCTTCCTCCAATTCCACAATGTTCATACAATCTTGATATGGATTATCAACTTCCTTCGGAGATGTTTTTTGACCAATATCCTCAAAATCCAATTCAATCATCTGAGGAGATTCAATATGAGATATTAGAACCTTGGTTACTAGCTGAATGCGTTCCTTTTTGGCCCTTTGATCAATGA 1698 0.3304 MASSSLQQEKGNHGDDTGNIMLKKGTWSSQEDQVLVEYVKNYGARKWDSVRKKTKLVRDGKSCRLRWLNHLKPTLKKCSFNEEEREKLIRLYKELGPKWSRMVSKFPGRTDNELKNFINSRKRSLKNSRKNLARESINHVDELNDNVGEIRLKKGSSNQNNNAFEEEEEMTLPRVEFDHQNIMHANYLNQIYDEANINFKPLSTLIDDSNMLYNNVGSFSLSNSREFLIPKSINLVDELIDDIERLSMMKGSSNQNNIVFEEEEMTLPRMEFDDQDILYANYLDPIYEEANINFEPFSTLVDDSNMQYNKMGSFSLSNSREFLIPKSINNVDELIASVEEFSMMKDSSNQNNNASEEEMTLPRVESNHQDIMHANYLEENINFEQLSRLVNDSNMLYNNVESSSLSNHIVPTLNDRFSTHPECLYFQDEENINNLEPLSKLDDDLNMPYNNVENTSLSVVPDLLTFPENTSLSMVPDLLTFPECSHTQDREDTLPSFPSCNMVFDQDLPPIPQCSYNLDMDYQLPSEMFFDQYPQNPIQSSEEIQYEILEPWLLAECVPFWPFDQ 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02986 565 Gene3D - 23 77 - -
Vivi7g02986 565 ProSiteProfiles Myb-like domain profile. 19 71 IPR001005 -
Vivi7g02986 565 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 19 75 IPR017930 -
Vivi7g02986 565 Gene3D - 78 145 - -
Vivi7g02986 565 SMART sant 76 124 IPR001005 -
Vivi7g02986 565 SMART sant 23 73 IPR001005 -
Vivi7g02986 565 MobiDBLite consensus disorder prediction 1 22 - -
Vivi7g02986 565 SUPERFAMILY Homeodomain-like 23 116 IPR009057 -
Vivi7g02986 565 CDD SANT 79 122 IPR001005 -
Vivi7g02986 565 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 76 126 IPR017930 -
Vivi7g02986 565 CDD SANT 26 71 IPR001005 -
Vivi7g02986 565 PANTHER TRANSCRIPTION FACTOR MYB33-RELATED 10 354 - -
Vivi7g02986 565 ProSiteProfiles Myb-like domain profile. 72 116 IPR001005 -
Vivi7g02986 565 Pfam Myb-like DNA-binding domain 27 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02986 Vivi-Chr7 94567295 94569424 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02986 15 126 MYB Transcription Factor Family AT4G26930 51.786 7.28e-37 139
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Vivi7g02986 Myb_DNA-bind_6 1.7e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02986 K09422 - vvo:131619741 1134.4