Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02978 ATGAAGAAGAAACTTGATACTCGTTTCCCTGCTGCCAGGATTAAGAAAATTATGCAAGCTGATGAAGATATAGGGAAGATTGCAATGGCCGTGCCTCTTCTAGTTTCCAAAGCACTAGAACTATTTCTGCAAGATTTGTGCCATAGGACATATGATGTAACACTTAGGAGGGGAGCAAAGACTATGAATGCTTTTCATTTGAAACAATGCGTACAATCTTTTAATGTCTTTGATTTTCTGAATGATATTGTGAGCAAGGTTCCTGATTTAGGCGGTTCTGTTGCAACTGGCGACGACCACACTGTCACTAAGAGGAGGAAAGTTGCTGAAGATGATGATAATGACAGCGACGAAGAAACCAAGAGAAATAAAATGCCAGAACCTGCACATACCAGTGGAAGAGGAAGAGGTAGGGGTAGAGGCAGGGGTCGTGGCCGTGGTCGTGGAAATAAAGCTGTCGATCAAGAGATTTGTTCACATGTCAAATTTGAAGACGGTTCACATGTCAAGTTTGAAGATGGTTCACATGTCAAATTTGAAGATGGTTCAGAAGCCTGGAAACAAAATGGCAACCATACTCAAATTAATGATAGCCCGGAAAATGTGCCAGAACCTAAGGAAGTTAAGCCGAGTTCATCATTTAGAGAATCCGAGGAAGTAAAGCAGAGTTCACCAGTCAGAAAACCTGCCGTTGTTCGAAATTTTGATTTAAATTTGGAGCCAGACGAGAACATGGATTTCTTATCCACACCAACTCCTGTCCCATCTTGTTCACAGCCTAGAAAATCAATTTCTGAAGAAAAGATTGAGGAATACCCTGGATGGTCCTTATCTGATATGGAAAAAATGGCTATTGATCCCATACAGCTAGCCAGCTTAAATAATAGGATTGATGAAGATATGGAAGATTATGATGAAGAAGTATAG 927 0.4067 MKKKLDTRFPAARIKKIMQADEDIGKIAMAVPLLVSKALELFLQDLCHRTYDVTLRRGAKTMNAFHLKQCVQSFNVFDFLNDIVSKVPDLGGSVATGDDHTVTKRRKVAEDDDNDSDEETKRNKMPEPAHTSGRGRGRGRGRGRGRGRGNKAVDQEICSHVKFEDGSHVKFEDGSHVKFEDGSEAWKQNGNHTQINDSPENVPEPKEVKPSSSFRESEEVKQSSPVRKPAVVRNFDLNLEPDENMDFLSTPTPVPSCSQPRKSISEEKIEEYPGWSLSDMEKMAIDPIQLASLNNRIDEDMEDYDEEV 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02978 308 MobiDBLite consensus disorder prediction 186 227 - -
Vivi7g02978 308 MobiDBLite consensus disorder prediction 186 200 - -
Vivi7g02978 308 FunFam dr1-associated corepressor homolog 1 86 - -
Vivi7g02978 308 MobiDBLite consensus disorder prediction 91 153 - -
Vivi7g02978 308 MobiDBLite consensus disorder prediction 99 134 - -
Vivi7g02978 308 MobiDBLite consensus disorder prediction 242 267 - -
Vivi7g02978 308 Gene3D Histone, subunit A 1 86 IPR009072 GO:0046982
Vivi7g02978 308 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 120 - -
Vivi7g02978 308 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 8 71 IPR003958 -
Vivi7g02978 308 SUPERFAMILY Histone-fold 3 88 IPR009072 GO:0046982
Vivi7g02978 308 MobiDBLite consensus disorder prediction 209 223 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02978 Vivi-Chr7 94427103 94430170 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02978 1 297 CCAAT-HAP5 Transcription Factor Family AT3G12480 43.607 3.90e-61 194
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Vivi7g02978 CBFD_NFYB_HMF 1.3e-17 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02978 K21752 - gmx:100814800 397.512
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02978 7 94427103 94430170 Vivi7g02978 7 94427103 94430170 ECH