Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02972 ATGGCGTCTAAAGCTATCGCTCCAATTGAACAACCCAGAGGTGAGAATAAGAAAAAGAATGTAGGAGTAGAAGGAAGAAACAGAAAGGTTCTTGGAGATATTGGAAATCTTGTGATTAATCCTGCAGATCCTCATGCTAATGAGCCTAAGCGCATCACAAGGAATCAATTAGCTGCTATTGCTCAAGCAGCAGAGAAGAACAAGATATTAGTACCTGATGTTGTCAATGGAAACTTTGTTGCTGCCAAAAAGATGGAACAAGCTCAGAAACCTGCTGAACATGAAGTTATTGTCATCAGCTCTGATGATGAATCTGAAGTGAAAGAGAAACAGCCTCTTAAAGGAAGAAAGTTAAGAGAAAGATCTAAGATAAATGTCAGGACATTCAGTTCTGTGCTTTCAGCTAGAAGCAAGGCTGCTGGTAGAAATGTGCCAAATGATATGGTAATGAACATTGATGCAACTGACAAGGATAATGAGTTGGCTGCAACTGAGTACATTGATGATATTTATCAGTTTTACAAACTCAGCGAAGATGACTGTCCTGTACATGATTACATGGTTTCACAGCCAGATATAAATGCCAAGATGAGAGCGATTCTTGTTGATTGGTTGATTGAAGTTCATCGGAAATTCGAACTCATGCCAGAAACTTTCTATCTGACTCTTAATATTGTTGACCGATTTTTGTCCATGAAGGCTGTTCCTAGAAAGGAACTTCAGCTTGTTGGCATAAGCTCAATGCTTATTGCTTCTAAATATGAAGAGATATGGGCACCAGAGGTTACTGACTTTGTATGCATATCAGACAATGCCTATGTTAGAGAACAGGTTCTGGTTATGGAGAAAACAATCTTGGGAAAATTGGAATGGTATTTAACAGTTCCTACTCCTTATGTTTTTCTGGTTCGGTACATCAAAGCCTCCACTCCCTCTGATGAACAGATGGAGAATATGGTGAATTTCCTAGCTGAACTTTCTATGATGCATTATGTTACTGTATCATTGTACTCTCCTTCTATGATTGCTGCTTCTGCTGTTTATGCCGCAAGATCTACACTTAAGAGGAGTCCTTTGTGGACTGACACTCTCAAGCACTACACAGGCTATTCTGAGGAGCAACTAAGGGATTGTGCCACACACATGGTCAGTTTTCATTCTGCTGCACCTGAGAGTAAGCTGAGGGCGATTTACAAGAAATTCTGTAGCACAGATCGTTGTTCTGTTGCTCTGGTGGCTCCAGCCAAAAACTTGTCAGCAGAGTCTTAA 1269 0.4027 MASKAIAPIEQPRGENKKKNVGVEGRNRKVLGDIGNLVINPADPHANEPKRITRNQLAAIAQAAEKNKILVPDVVNGNFVAAKKMEQAQKPAEHEVIVISSDDESEVKEKQPLKGRKLRERSKINVRTFSSVLSARSKAAGRNVPNDMVMNIDATDKDNELAATEYIDDIYQFYKLSEDDCPVHDYMVSQPDINAKMRAILVDWLIEVHRKFELMPETFYLTLNIVDRFLSMKAVPRKELQLVGISSMLIASKYEEIWAPEVTDFVCISDNAYVREQVLVMEKTILGKLEWYLTVPTPYVFLVRYIKASTPSDEQMENMVNFLAELSMMHYVTVSLYSPSMIAASAVYAARSTLKRSPLWTDTLKHYTGYSEEQLRDCATHMVSFHSAAPESKLRAIYKKFCSTDRCSVALVAPAKNLSAES 422
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02972 422 Pfam Cyclin, N-terminal domain 169 293 IPR006671 -
Vivi7g02972 422 SUPERFAMILY Cyclin-like 158 293 IPR036915 -
Vivi7g02972 422 Gene3D - 169 410 - -
Vivi7g02972 422 SUPERFAMILY Cyclin-like 297 417 IPR036915 -
Vivi7g02972 422 ProSitePatterns Cyclins signature. 198 229 IPR006671 -
Vivi7g02972 422 Gene3D - 183 294 - -
Vivi7g02972 422 SMART Cyclin_C_2 296 415 IPR004367 -
Vivi7g02972 422 MobiDBLite consensus disorder prediction 1 24 - -
Vivi7g02972 422 Pfam Cyclin, C-terminal domain 296 412 IPR004367 -
Vivi7g02972 422 FunFam Cyclin-B1-4 182 289 - -
Vivi7g02972 422 PIRSF Cyclin_A_B_D_E 2 422 IPR046965 GO:0016538|GO:0044772
Vivi7g02972 422 SMART cyclin_7 203 287 IPR013763 -
Vivi7g02972 422 SMART cyclin_7 300 384 IPR013763 -
Vivi7g02972 422 PANTHER CYCLINS 119 400 IPR039361 -
Vivi7g02972 422 CDD CYCLIN_AtCycB-like_rpt1 147 291 - -
Vivi7g02972 422 FunFam G2/mitotic-specific cyclin-1 290 410 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02972 Vivi-Chr7 94372003 94374845 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02972 1 419 Core Cell Cycle Gene Families AT2G26760 51.064 2.37e-142 409
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02972 K21777 - gmx:547782 550.051