Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02963 ATGCGTCCTCATCTTTCTCCCTCATTTTATAGGAATGAATTCCTAGAACAAAATTCTACGAGACTTGAGAGTGGACACATGATCCATCCCATGACCAACTCAAACAATGAAGTACCTTTTCTAGGTGGAGTTCTTGAGCTCTCTGAAGAGTCAACGAAGGACAATTCCTCGCCCCACTCCAAAAAACACAAGGGTAGACCTCCGGGGTCTAAGAGCATACCGAAACCACCCATGATTATAATGGAAAACTCAATTGTTGACATGGAAAATATTGTGCTTGAAATTCCTATTGGAAATGATGTCGTGGAGGCCATAATCGGCTTTGCTAGGCGTCATGAAGCTAGTATAGCCGTGACGAATGGTTCTGGTCTTGTCTCTAACATTACCTTTCTCGAACCAGATTCTCGTGTCCCAGCTTTCCAATTGGATGGCCCGTTCAATGTGTTATCACTAGCTGGAGTGTATTTAAATCCTGATTGTTTCCGTGTTCCTCCTCAACTTGTCAACGATCCATTGTGTACCGCATTTGCCCTTCAACTCTCTGGATCACGAGGACAAGTGTTTGGCGGAGTGATTGGAGGGAAGGTTAAAGCTGCCAGTGACATTCAAATTTCAGCCTCACTTTTCAAGAAGCCTGAAATCATTAGAGTGGTGACCACTGATGGGAATGTTCAATTATTTGAAGATGATGACATCCCAACGATTGATGATGATGATACCGATGATGGTGTTGTTGATGTCGGTGAAACTTAA 753 0.4329 MRPHLSPSFYRNEFLEQNSTRLESGHMIHPMTNSNNEVPFLGGVLELSEESTKDNSSPHSKKHKGRPPGSKSIPKPPMIIMENSIVDMENIVLEIPIGNDVVEAIIGFARRHEASIAVTNGSGLVSNITFLEPDSRVPAFQLDGPFNVLSLAGVYLNPDCFRVPPQLVNDPLCTAFALQLSGSRGQVFGGVIGGKVKAASDIQISASLFKKPEIIRVVTTDGNVQLFEDDDIPTIDDDDTDDGVVDVGET 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02963 250 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 209 IPR005175 -
Vivi7g02963 250 MobiDBLite consensus disorder prediction 48 77 - -
Vivi7g02963 250 CDD DUF296 91 196 IPR005175 -
Vivi7g02963 250 Gene3D - 88 230 - -
Vivi7g02963 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 218 IPR014476 GO:0003680
Vivi7g02963 250 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 224 - -
Vivi7g02963 250 ProSiteProfiles PPC domain profile profile. 85 230 IPR005175 -
Vivi7g02963 250 MobiDBLite consensus disorder prediction 231 250 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02963 Vivi-Chr7 94143628 94144380 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02963 61 217 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.000 2.54e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02963 - - vvo:131619736 433.721