Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02962 ATGGCAAACGACAAAAATACATCCTCATCTTTCTCTCCATTAGTTAGGAACGAATTATCAGAAGAGAATTCTCAAAAATTTGAGAGTGGAAACATAATCCCTCACATCACCAACCCAAACAATGAACAACCCGGTGGAGTTGTTGAACTTTCTGAAGAGCTAACGGAGGACAACTCCTCGCCCCCCTCAATTGCTGACATGGAAAACATTGTCCTGGAGATCCCTATTGGAAATGATGTTGTGGAAGCCATAATAGACTTTGCTAGGCGTCATGAAGCTAGCATAAACGTGATGACGGGTTCTGGTCTTGTCTCTGATATTACCCTTCTCGAACCAGATTCCCGTGTCCCGACTTTCCAATTAGATGGTCCGTTCAATATGTTATCTCTCGCTGGAGTGTATTTAAATCCTAATTGTTTTCATGTTCCTCCTCAACTTATCAAAGATCCATTGTGTACCGCGTTTACCCTTCAACTCTCTGGATCTCGAGGACAAGTGTTTGGCGGAGTGATTGGAGGAAAGATTAATGCGGCCAGTGACATTCAGATTTCGGCCTTTCTTCTCAAGAGGCCCGGATTCGTTAGGATGGTCACCGATGATGGAAATGTTCACTTATTTGAAGATGACGACGTCCCAACAATTGTTGGTGATGTTGATGTTGATGATGGTGGTGTTGATGCACGCGAAACTCAATCAAAATTTGATGATCAAATTCTCTCTTAG 723 0.4288 MANDKNTSSSFSPLVRNELSEENSQKFESGNIIPHITNPNNEQPGGVVELSEELTEDNSSPPSIADMENIVLEIPIGNDVVEAIIDFARRHEASINVMTGSGLVSDITLLEPDSRVPTFQLDGPFNMLSLAGVYLNPNCFHVPPQLIKDPLCTAFTLQLSGSRGQVFGGVIGGKINAASDIQISAFLLKRPGFVRMVTDDGNVHLFEDDDVPTIVGDVDVDDGGVDARETQSKFDDQILS 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02962 240 Pfam Plants and Prokaryotes Conserved (PCC) domain 70 185 IPR005175 -
Vivi7g02962 240 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 65 199 IPR014476 GO:0003680
Vivi7g02962 240 MobiDBLite consensus disorder prediction 1 45 - -
Vivi7g02962 240 Gene3D - 67 209 - -
Vivi7g02962 240 SUPERFAMILY AF0104/ALDC/Ptd012-like 66 205 - -
Vivi7g02962 240 ProSiteProfiles PPC domain profile profile. 64 209 IPR005175 -
Vivi7g02962 240 CDD DUF296 70 175 IPR005175 -
Vivi7g02962 240 MobiDBLite consensus disorder prediction 1 46 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02962 Vivi-Chr7 94141431 94142153 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02962 67 204 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.333 5.97e-21 87.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02962 - - vvo:131619736 281.182