Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02961 ATGCGTCCTCATCTTTCTCCCTCATTTTTTAGGAACAAATTCCTAGAACAAAATTCTACGAGACTTGAGAGTGGACACATGATCCATCCCATGACCAACTCAAACAATGAAGAACCTTTTCTAGGTGGATTTCTTGAGCTCTCTGAAGAGTCAACGAAGGACAATTCCTCGCCCCTCTCCAAAAAACACAAGGGTAGACCTTCGGGGTCTAAGAGCATACCGAAACCACCCATGATTATAATGGAAAACTCAATTGTTGACATGGAAAATATTGTGCTTGAAATTCCTATTGGAAATGATGTCGTGGAGGCCATAGTCGGCTTTGCTAGGCGTCATGAAGCTAGTATAGCCGTGACGAATGGTTCTGGTCTTGTCTCTAACATTACCTTTCTCGAACCAGATTCTCGTGTCCCAGCTTTCCAATTGGATGGCCCGTTCAATGTGTTATCACTAGCTGGAGTGTATTTAAATCCTGATTGTTTCCGTGTTCCTCCTCAACTTGTCAACGATCCATTGTGTACCGCATTTGCCCTTCAACTCTCTGGATCACGAGGACAAGTGTTTGGCGGAGGGATTGGAGGGAAGGTTAATACTGCCAGTGACATTCAAATTTCAGCCTCACTTTTCAAGAAGCCTAAAATCATTAGAGTGGTGACCACTGATGGGAATGTTCAATTATTTGAAGATGATGACATCCCAACGATTGATGATGATGATACCAATGATGGTGTTGTTGATGTCGGTGAAACTTAA 753 0.429 MRPHLSPSFFRNKFLEQNSTRLESGHMIHPMTNSNNEEPFLGGFLELSEESTKDNSSPLSKKHKGRPSGSKSIPKPPMIIMENSIVDMENIVLEIPIGNDVVEAIVGFARRHEASIAVTNGSGLVSNITFLEPDSRVPAFQLDGPFNVLSLAGVYLNPDCFRVPPQLVNDPLCTAFALQLSGSRGQVFGGGIGGKVNTASDIQISASLFKKPKIIRVVTTDGNVQLFEDDDIPTIDDDDTNDGVVDVGET 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02961 250 Gene3D - 88 230 - -
Vivi7g02961 250 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 209 IPR005175 -
Vivi7g02961 250 MobiDBLite consensus disorder prediction 230 250 - -
Vivi7g02961 250 SUPERFAMILY AF0104/ALDC/Ptd012-like 88 224 - -
Vivi7g02961 250 MobiDBLite consensus disorder prediction 51 76 - -
Vivi7g02961 250 CDD DUF296 91 159 IPR005175 -
Vivi7g02961 250 ProSiteProfiles PPC domain profile profile. 85 230 IPR005175 -
Vivi7g02961 250 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 218 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02961 Vivi-Chr7 94139040 94139792 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02961 54 217 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.132 4.10e-26 101
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02961 - - vvo:131619736 445.277