Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02960 ATGGCAGACGACAAAAATACATCCTCATCTTTCTTTCCATTAGTTAGGAACGAATTTTTAGAAGAGAATTCTCAAAAACTTGAGAGTGAAGACATAATCCCTCACATCACCAACCTAAACAATGAACAGCCTTTCTCTGGTGGGATTGTTGAACTCTCTGAAGAGTCAATGGAGGACAACTCCTCGTCCCCCTTAATCGGTGACATGAAAAACATTATCCTGGAGATCCCTATTGGAAATGATGTTGTGGAAGCCATAATAGACTTTGCTAGGCGCCATGAAGCTAGCATAACCGTAATGACGGGTACTGGTCTTGTCTCTGATATTACACTTCTCGAACCAGATTCCCGTGTCCCAACTTTCCAATTAGATGGTCCATTCAATATGTTATCTCTCGCTGGAGTGTATTTAAATCCTAATAGTTTTCATGTTCCTCCTCAGCTTATCAAAGATCCATTGTGTACTGCGTTTACCCTTCAACTCTCTGGATCTCGAGGACAAGTGTTTGGCGGAGTGATTGGAGGAAAGATTAATGCGGCCAGTGACATTCAGATTTCGGCCTTTCTTCTCAAGAGGCCCGGATTCGTTAGGATGGTCACCGATGATGGAAATGTTCATTTATTTGAAGATGACGACGTCCCAACAATTGCTGGTGATGTTGATGTCGATGATGGTGGTGTTGATGCACGTGAAACTCAATCAAAATTAGATGATCAAATTCTCTCTTAG 729 0.4198 MADDKNTSSSFFPLVRNEFLEENSQKLESEDIIPHITNLNNEQPFSGGIVELSEESMEDNSSSPLIGDMKNIILEIPIGNDVVEAIIDFARRHEASITVMTGTGLVSDITLLEPDSRVPTFQLDGPFNMLSLAGVYLNPNSFHVPPQLIKDPLCTAFTLQLSGSRGQVFGGVIGGKINAASDIQISAFLLKRPGFVRMVTDDGNVHLFEDDDVPTIAGDVDVDDGGVDARETQSKLDDQILS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02960 242 Gene3D - 69 211 - -
Vivi7g02960 242 MobiDBLite consensus disorder prediction 219 242 - -
Vivi7g02960 242 Pfam Plants and Prokaryotes Conserved (PCC) domain 72 187 IPR005175 -
Vivi7g02960 242 ProSiteProfiles PPC domain profile profile. 66 211 IPR005175 -
Vivi7g02960 242 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 69 202 IPR014476 GO:0003680
Vivi7g02960 242 CDD DUF296 72 177 IPR005175 -
Vivi7g02960 242 SUPERFAMILY AF0104/ALDC/Ptd012-like 68 207 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02960 Vivi-Chr7 94135572 94136300 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02960 69 206 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.333 3.86e-21 87.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02960 - - vvo:131619736 293.508