Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02958 ATGGCTGACGATAAAAATGCATCCTCACATTTTTCTCCTTTCTCTAGTAATGAATTCCTAAAAGAGAATTCTTCAATATCTGAGAGTGAACATATATTCTCTCAAACCACCAACCCAAACACATTGATGATTTCTGAGCTCACTGAAGAGTCAATGGAGGACAATCCCTCGTCCTCTGCTGGAAGACACATGGGTAGACCTTCAGGGTCAAAGAACAAACCCAAACCACCCATGATTATCATGGAAAACTCAATAGCTGATATGGAAAATATTATTCTTGAGATTCCAATTGGAAATGATGTTGTGGAGACCATAATCGACTTTGCTAAGCGTCATGAAGCTAGAATAGTCGTGGTGAACGGTTCTGGTCTTGTCTCTGACGTTACACTTCTTCTTCCGAATTCTCGTATCCCAGCTTTCCAATTGGATGGTCCGTTTAATGTGTTATCACTAGCTGGAGCGTATTTAAACCCTGATTATGCCGCTTTTTCCCTTCAGCTCTCTGGATCTCGAGGGCAAGTGTTTGGCGGAGTGATTGGAGGAAAAATTAATGCTGCTAGCGACATTCATATTTCAGCCTCTCTTTTTAAGAGGCCTGAATTCATTAAAGCGGTCACCACTAATGGAAATGTTCAATTATTTGAAGACTATGACATTGCAACAATTACTGGTTGTGCTGATGCTAATAATGGTGGTGAAACTCAATCAGTTGATCAAATTCTCCCTTAG 729 0.4047 MADDKNASSHFSPFSSNEFLKENSSISESEHIFSQTTNPNTLMISELTEESMEDNPSSSAGRHMGRPSGSKNKPKPPMIIMENSIADMENIILEIPIGNDVVETIIDFAKRHEARIVVVNGSGLVSDVTLLLPNSRIPAFQLDGPFNVLSLAGAYLNPDYAAFSLQLSGSRGQVFGGVIGGKINAASDIHISASLFKRPEFIKAVTTNGNVQLFEDYDIATITGCADANNGGETQSVDQILP 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02958 242 SUPERFAMILY AF0104/ALDC/Ptd012-like 87 196 - -
Vivi7g02958 242 CDD DUF296 91 183 IPR005175 -
Vivi7g02958 242 ProSiteProfiles PPC domain profile profile. 85 217 IPR005175 -
Vivi7g02958 242 Pfam Plants and Prokaryotes Conserved (PCC) domain 91 196 IPR005175 -
Vivi7g02958 242 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 40 202 IPR014476 GO:0003680
Vivi7g02958 242 MobiDBLite consensus disorder prediction 1 77 - -
Vivi7g02958 242 MobiDBLite consensus disorder prediction 8 65 - -
Vivi7g02958 242 Gene3D - 88 217 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02958 Vivi-Chr7 94098944 94099672 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02958 62 201 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 36.364 1.49e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02958 - - vvo:131619736 278.1