Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02957 ATGGAAAACTCAATTGCTAACATGGAAAATATTTTTCTTGAGATACCTATTGGAAATGATGTTGTGGAAGCTATAATCGACTTTGCTAAGAGTCGTGAAGCTAGCATAGTCGTGATGAAGGGTTCCGGTCTTGTATCTGACATTACCCTTCTCCAATCAGATTCTCGTATCCCAACTTATAAATTAGATGGCCCGTTTAATGTGTTATCTCTGGCCGGAGTGTACTTAAATCCCAATTGTTGTCGTGTTCCTGATCATCTCATCTATGATCCATTATGTACTGCTTTTGCCCTTCAACTCTCTGGATCTCGAGCGCAAGTGTTTGGCGGAGTGATTGGAGGAAAAATTATTGCTGCCAGTGACATTCAGATTTCAGCCTCTCTCTTCAAGAGGCCCGATTTCCTTAGGCTGGTCACCACTAATGGGAATGTTCAAGTATTTGAAGATGATGACGTCCCAACAATTGTTGGTGATGTTGATGCCGGTGATGGTGGTGTTGATGGCAGTGAATCTGAATCTTAA 522 0.4195 MENSIANMENIFLEIPIGNDVVEAIIDFAKSREASIVVMKGSGLVSDITLLQSDSRIPTYKLDGPFNVLSLAGVYLNPNCCRVPDHLIYDPLCTAFALQLSGSRAQVFGGVIGGKIIAASDIQISASLFKRPDFLRLVTTNGNVQVFEDDDVPTIVGDVDAGDGGVDGSESES 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02957 173 Pfam Plants and Prokaryotes Conserved (PCC) domain 11 129 IPR005175 -
Vivi7g02957 173 SUPERFAMILY AF0104/ALDC/Ptd012-like 7 143 - -
Vivi7g02957 173 Gene3D - 8 150 - -
Vivi7g02957 173 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 6 140 IPR014476 GO:0003680
Vivi7g02957 173 CDD DUF296 11 118 IPR005175 -
Vivi7g02957 173 ProSiteProfiles PPC domain profile profile. 5 150 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02957 Vivi-Chr7 94041872 94042393 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02957 8 137 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 33.333 2.77e-19 80.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02957 - - vvo:131619731 302.367