Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02953 ATGGCAGCGCCGATCGCAATGCTACCTCCATTTATGACGATTAGCCGTGAGTATTGGTGTCATGTAGCTGGTGACCTTCCATTTACTCCTTCAATAGGAATGGTTGTTAAGTACTTGCCTTTTGGGCATCTCGAGCATTCTGATCTTGAACCAGATGATGACTTCTCCATAGAACAAACAATGCAAAATCATTACCAGGTATCGTTTACGTGTACTATATCAGACATTGACTTTCTTATTGATACCACCAGTGAAGAAATATTCTGCCATATTACCCTGCACCATAATCTTTTTCCCATGCTTAACCCTCCCATGCCTGTTCTTGAATCCACCATCACTAGTTATTGTTGGAAAACAATGACACCCGCTGATGAAAATAATAAGTTGTATCTTACTGCCGAGTGTAGAAATGTTTTTACACCTCACGTGGGAACAGAGCAAATTACGATTGAAGACATGATAGGAGCTTCATGGCGTTTTAGCCATTCCGCTGGAAAAAATAACACCTACCACTTCAGTGCGGGATGGAATGTTTTTCGACTCGCAAAAAGACTTGTCAGAGGTGATAAATTGTTTTTTGCAAAGACAACCGCTGGAACTTACAAGGTTTGTATTAAAAGAGTCTCAAGGGAAGGAGCAACTTTTGGACCCAACCGATCTTTGGTGAGGGGAGTGAATAGCGTTGAAGATTCTTTGCTGGCCCTAATGGAAGGGGAAGATATTGAGTTTAAAGTGGTATTTCATCCTTCATTGCCGAGTTTTATTGTAAATCCAACTTATTTGGATTTTGCTCAAACATTTAACTACGTCATTGGTACGCGTGTGAAATTTTGCGGAGTTCCAGCTTCGATCATTAACATCAATAGACGTGAAATAGATATAACAGTCGCGGGACCTAACGCCTTCTCATGGAGAATGGTACAGGTATTGGCTGATGGACAAGTGGAAAGTGAATCGGCAAACATCTGGGAGCTTGCTCTTAATTAG 987 0.4124 MAAPIAMLPPFMTISREYWCHVAGDLPFTPSIGMVVKYLPFGHLEHSDLEPDDDFSIEQTMQNHYQVSFTCTISDIDFLIDTTSEEIFCHITLHHNLFPMLNPPMPVLESTITSYCWKTMTPADENNKLYLTAECRNVFTPHVGTEQITIEDMIGASWRFSHSAGKNNTYHFSAGWNVFRLAKRLVRGDKLFFAKTTAGTYKVCIKRVSREGATFGPNRSLVRGVNSVEDSLLALMEGEDIEFKVVFHPSLPSFIVNPTYLDFAQTFNYVIGTRVKFCGVPASIININRREIDITVAGPNAFSWRMVQVLADGQVESESANIWELALN 328
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02953 328 SUPERFAMILY DNA-binding pseudobarrel domain 114 208 IPR015300 -
Vivi7g02953 328 Pfam B3 DNA binding domain 118 207 IPR003340 GO:0003677
Vivi7g02953 328 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 13 324 IPR044835 GO:0003677|GO:0006355|GO:0009725
Vivi7g02953 328 CDD B3_DNA 118 207 IPR003340 GO:0003677
Vivi7g02953 328 SMART B3_2 116 209 IPR003340 GO:0003677
Vivi7g02953 328 ProSiteProfiles B3 DNA-binding domain profile. 147 209 IPR003340 GO:0003677
Vivi7g02953 328 Gene3D - 114 208 IPR015300 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02953 2 312 B3 DNA Binding Superfamily AT5G62000 25.740 4.80e-16 77.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Vivi7g02953 B3 1.7e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02953 - K14486 vvo:131619729 679.093