Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02938 ATGGGCAACTGTTGCTCAGGTGGCACTGATGATCCTGAAGACAAGGGAGAAACAGATCAACAAAACAACAATGCCAATGCAAATGGTGACTCTTCTTCTGCTACAACGCCGCCGCCGTCTTCAAAACCTTCTAAACCGTCCAAACCGGCCGCGATGGGACCGGTCCTCGGAAGGCCAATGGAAGATGTCAAAAGTACTTATAGCATTGGGAAGGAACTAGGGAGAGGACAATTTGGTGTAACATATTTGTGCACACATAAAACCACTGGAAAACAATATGCTTGCAAAACAATAGCCAAGAGAAAGCTTGTTAACAAAGAAGACATTGAAGATGTTAAGAGGGAGGTTCAAATCATGCATCATCTCACAGGGCAGCCTAATATTGTCGAGCTTATCGGCGCTTTTGAAGATAAACAATCTGTTCATTTGGTTATGGAGTTGTGCGCGGGCGGTGAACTTTTCGACCGAATCATCGCGAAAGGTCATTACACCGAACGCGCTGCGGCTTCCTTGTTGCGAACCATTGTTCAGATTGTTCATACCTGTCATTCCATGGGTGTTATACATAGAGATCTTAAGCCAGAGAATTTCCTTTTGTTGAACAAGGACGAGACTTCGCCTCTCCAAGCTACCGATTTCGGTTTATCCGTCTTTTACAAGCAAGGAGAAGTGTTTAAAGATATTGTCGGTAGCGCGTATTACATTGCACCGGAGGTTTTGAAGAGAAAATACGGACCAGAAGTAGACATTTGGAGCGTTGGCGTCATGTTATACATTCTTCTATGTGGTGTTCCACCATTTTGGGCAGAATCTGAAAATGGCATATTCAATGCCATCCTAAAAGGCCACGTCGACTTCTCGAGCGATCCATGGCCCTCCATTTCGCCTGCAGCAAAAGATCTTGTAAGGAAAATGCTGAACTCGGATCCTAAGCAGAGGCTAACTGCATATGAAGTTTTGAATCATCCATGGATCAAGGAAGACGGAGAAGCACCGGATACACCTCTCGACAATGCTGTGCTCAATAGACTCAAACAGTTCAGAGCGATGAACCAGTTCAAGAAAGTTGCGCTAAAGGTTATTGCTAGCTGCTTATCAGAAGAAGAAATCATGGGATTGAAGCAGATGTTTAAGGGTATGGACACCGACAACAGTGGAACGATAACGATTGAAGAGCTAAAACAAGGACTTGCAAAACAAGGAACTAGGTTGACAGAACAAGAAGTTAAGCAATTAATGGAAGCTGCAGATGCTGATGGCAATGGAATTATAGATTATGACGAGTTCATCACAGCAACGATGCACATGAACCGATTGAACAGAGAAGAACATGTTTATACTGCATTCCAATACTTCGATAAAGATAACAGCGGCTACATTACAATTGAAGAACTAGAGCAAGCTTTACATGAGTATAACATGCATGATGGCAGGGACATAAAGGAAATCATTTCAGAAGTTGATGCAGATAATGATGGTCGGATTAACTACGATGAGTTTGCTGCTATGATGAGCAAAGGAAACCCGGAAGCACATACCAAGAAACGGCGTGATTCAACCTTGTTTTAG 1569 0.4328 MGNCCSGGTDDPEDKGETDQQNNNANANGDSSSATTPPPSSKPSKPSKPAAMGPVLGRPMEDVKSTYSIGKELGRGQFGVTYLCTHKTTGKQYACKTIAKRKLVNKEDIEDVKREVQIMHHLTGQPNIVELIGAFEDKQSVHLVMELCAGGELFDRIIAKGHYTERAAASLLRTIVQIVHTCHSMGVIHRDLKPENFLLLNKDETSPLQATDFGLSVFYKQGEVFKDIVGSAYYIAPEVLKRKYGPEVDIWSVGVMLYILLCGVPPFWAESENGIFNAILKGHVDFSSDPWPSISPAAKDLVRKMLNSDPKQRLTAYEVLNHPWIKEDGEAPDTPLDNAVLNRLKQFRAMNQFKKVALKVIASCLSEEEIMGLKQMFKGMDTDNSGTITIEELKQGLAKQGTRLTEQEVKQLMEAADADGNGIIDYDEFITATMHMNRLNREEHVYTAFQYFDKDNSGYITIEELEQALHEYNMHDGRDIKEIISEVDADNDGRINYDEFAAMMSKGNPEAHTKKRRDSTLF 522
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02938 522 Gene3D Phosphorylase Kinase; domain 1 69 152 - -
Vivi7g02938 522 ProSitePatterns EF-hand calcium-binding domain. 488 500 IPR018247 -
Vivi7g02938 522 Gene3D - 333 511 - -
Vivi7g02938 522 Gene3D Transferase(Phosphotransferase) domain 1 153 332 - -
Vivi7g02938 522 FunFam calcium-dependent protein kinase 1 153 332 - -
Vivi7g02938 522 SUPERFAMILY Protein kinase-like (PK-like) 44 353 IPR011009 -
Vivi7g02938 522 ProSitePatterns EF-hand calcium-binding domain. 381 393 IPR018247 -
Vivi7g02938 522 SMART serkin_6 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02938 522 ProSitePatterns Serine/Threonine protein kinases active-site signature. 187 199 IPR008271 GO:0004672|GO:0006468
Vivi7g02938 522 CDD STKc_CAMK 67 324 - -
Vivi7g02938 522 ProSitePatterns EF-hand calcium-binding domain. 417 429 IPR018247 -
Vivi7g02938 522 FunFam Calcium-dependent protein kinase 1 333 508 - -
Vivi7g02938 522 ProSiteProfiles EF-hand calcium-binding domain profile. 479 510 IPR002048 GO:0005509
Vivi7g02938 522 Pfam Protein kinase domain 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02938 522 SMART efh_1 444 472 IPR002048 GO:0005509
Vivi7g02938 522 SMART efh_1 372 400 IPR002048 GO:0005509
Vivi7g02938 522 SMART efh_1 408 436 IPR002048 GO:0005509
Vivi7g02938 522 SMART efh_1 479 507 IPR002048 GO:0005509
Vivi7g02938 522 MobiDBLite consensus disorder prediction 1 59 - -
Vivi7g02938 522 Pfam EF-hand domain pair 443 505 IPR002048 GO:0005509
Vivi7g02938 522 Pfam EF-hand domain pair 373 433 IPR002048 GO:0005509
Vivi7g02938 522 ProSitePatterns EF-hand calcium-binding domain. 453 465 IPR018247 -
Vivi7g02938 522 MobiDBLite consensus disorder prediction 19 38 - -
Vivi7g02938 522 ProSiteProfiles EF-hand calcium-binding domain profile. 440 475 IPR002048 GO:0005509
Vivi7g02938 522 ProSiteProfiles Protein kinase domain profile. 67 325 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02938 522 SUPERFAMILY EF-hand 365 505 IPR011992 -
Vivi7g02938 522 ProSiteProfiles EF-hand calcium-binding domain profile. 404 439 IPR002048 GO:0005509
Vivi7g02938 522 PANTHER SERINE/THREONINE-PROTEIN KINASE 62 500 - -
Vivi7g02938 522 ProSiteProfiles EF-hand calcium-binding domain profile. 368 403 IPR002048 GO:0005509
Vivi7g02938 522 ProSitePatterns Protein kinases ATP-binding region signature. 73 100 IPR017441 GO:0005524
Vivi7g02938 522 FunFam Calcium-dependent protein kinase 1 69 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02938 Vivi-Chr7 93840542 93843138 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02938 1 521 EF-hand Containing Proteins AT5G12180 80.943 0.0 897
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CDPK Vivi7g02938 Pkinase 1.3e-76 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02938 K13412 - gmx:100820422 925.235