Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02926 ATGGATAGACGCCCACCGTTCTCTCTCACCCAAAATTCCTCTATCACATTGGGAACTAAGAGAGGGTTCATAGCCTCAAACACCACCACCATCACCACCACCAACAATGGTGGGATCCTCTCTCAAAATTTAAGAGAGAATCCTATCAAAAAACCGAGGGGTAGACCTAAGGGCTCAAAGAATAGGCCAAAACCACCGGTTATTATTAAGGAGAATAATGAAACTCTCATGGAATCGATTCTCATCGAGATCCCTCCTGGAAGAGACATCGTAGAGCCTCTCATCAAGTTGGCTTTGTCTCGTCAAGCTCGAATCATTGTGTTGAGTGGTTCTGGTCTTGTCTCGGAGGTCAGTTTTCTCCACCCAGTAACCCGTGCTTCGGGTATCCCCCTCGAAGGAGTGTTTCGTATGACATCTTTCTATGGAACTTTTGCCAGTGCCAACACTGATCGCTTTCGTCCACAGTTCACGAGCCCGAATTCACCGAATTCTCATTTCTCGATTTTCCTTTGTGGCAATCAAGGAAAAGTGTTTGGTGGAGTTGTTGGTGGGAGGGTTATAGCTGCTGGGGCTGTTTTGATTTCTGCCGCTCTTGTTAAGAATCCTACATTTGATAGGTTGGGCATCAATGCAACATTAGGCTAA 645 0.4605 MDRRPPFSLTQNSSITLGTKRGFIASNTTTITTTNNGGILSQNLRENPIKKPRGRPKGSKNRPKPPVIIKENNETLMESILIEIPPGRDIVEPLIKLALSRQARIIVLSGSGLVSEVSFLHPVTRASGIPLEGVFRMTSFYGTFASANTDRFRPQFTSPNSPNSHFSIFLCGNQGKVFGGVVGGRVIAAGAVLISAALVKNPTFDRLGINATLG 214
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02926 214 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 38 208 IPR014476 GO:0003680
Vivi7g02926 214 ProSiteProfiles PPC domain profile profile. 74 214 IPR005175 -
Vivi7g02926 214 MobiDBLite consensus disorder prediction 34 67 - -
Vivi7g02926 214 Gene3D - 77 212 - -
Vivi7g02926 214 Pfam Plants and Prokaryotes Conserved (PCC) domain 80 198 IPR005175 -
Vivi7g02926 214 SUPERFAMILY AF0104/ALDC/Ptd012-like 77 207 - -
Vivi7g02926 214 CDD DUF296 80 174 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02926 Vivi-Chr7 93776372 93777016 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02926 49 207 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 38.272 7.79e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02926 - - vvo:131619728 380.563