Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02918 ATGGAGTTGATTGTTATTGACATTCTTCCGGGAAGAGATGTGGTGGAGGATCTCATTAACTTAGCTCAATCTCGACAAGCTGGAATCACTGTGTTAAGTGGTTTTGGTTTAGTCTCTGATGTTACCATTCTCCTTCCAGAGACAGGGGCCACTGGTTTCCCCATCGAAGGACCATCCAATATGGTATTTCTAAGGGGAACTTACATAAACCCTAATATTGATCAAACTTCTTCCTCATCGATGAGTATTGCCTCGTCAAATTCATATTTCTCCATTTCTGTTTCCCGCGGAAACCAAGGACACATTTTTGGTGGAATTGTTCAAGGAAAGATCATAGCTGCAGGCGTTGTTAAAATTACTGCAGCTCTTATTAAAAAACCTGATTTTCATAAGTTGGGCAATATCGATGGAATTCATCACGAGACGTAA 429 0.4056 MELIVIDILPGRDVVEDLINLAQSRQAGITVLSGFGLVSDVTILLPETGATGFPIEGPSNMVFLRGTYINPNIDQTSSSSMSIASSNSYFSISVSRGNQGHIFGGIVQGKIIAAGVVKITAALIKKPDFHKLGNIDGIHHET 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02918 142 CDD DUF296 4 116 IPR005175 -
Vivi7g02918 142 ProSiteProfiles PPC domain profile profile. 1 142 IPR005175 -
Vivi7g02918 142 Pfam Plants and Prokaryotes Conserved (PCC) domain 4 124 IPR005175 -
Vivi7g02918 142 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 133 IPR014476 GO:0003680
Vivi7g02918 142 Gene3D - 1 138 - -
Vivi7g02918 142 SUPERFAMILY AF0104/ALDC/Ptd012-like 3 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02918 Vivi-Chr7 93628462 93628890 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02918 1 140 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 32.394 6.13e-16 70.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02918 - - vvo:131619722 263.077