Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02917 ATGGAACTGATTGTTATCGAGATTCCTTCGGGAAGAGATGTTGTTGAGTATCTCATTGATTTCGCTCAATCTCAACAAGTTGGAATCACCGTTTTAAGTGGTTCGGGTCTTGTATCCGATGTTACCATTCTCCTTCCGAAAGAACGTGTCATTGATTTTCCTGATGAAGGACAGTTTAATATGATATCTCTCAAGGGAACTTACATAAATCCTAATATTGATCAGCTTTCTCCCTCATTGTTGAGTATTGCCTCATCAAATGCAAATTTTTCGATTTTTGTTTCCAACGGCGACCAAGGACAAGTTTTTGGTGGAAAAGTTGAAGGAAAGATTATGGCTGCAAGCGTTGTTAAGATTACGGCTGCACTTTTTAAGAATCCTGAATATCATAAGTTGGGCAATATGGTTGAAAGTCCTCACGAGATGCAAGATGATAGGCTACCCATAATTAATACCGATCATCTTGAACATGAGTCCCAAAACTTTACCAACATCAATAATTAA 504 0.379 MELIVIEIPSGRDVVEYLIDFAQSQQVGITVLSGSGLVSDVTILLPKERVIDFPDEGQFNMISLKGTYINPNIDQLSPSLLSIASSNANFSIFVSNGDQGQVFGGKVEGKIMAASVVKITAALFKNPEYHKLGNMVESPHEMQDDRLPIINTDHLEHESQNFTNINN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02917 167 Gene3D - 1 143 - -
Vivi7g02917 167 ProSiteProfiles PPC domain profile profile. 1 146 IPR005175 -
Vivi7g02917 167 Pfam Plants and Prokaryotes Conserved (PCC) domain 4 125 IPR005175 -
Vivi7g02917 167 CDD DUF296 4 116 IPR005175 -
Vivi7g02917 167 SUPERFAMILY AF0104/ALDC/Ptd012-like 2 132 - -
Vivi7g02917 167 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 2 136 IPR014476 GO:0003680
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02917 Vivi-Chr7 93621343 93621846 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02917 1 140 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 36.111 2.06e-23 91.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02917 - - vvo:131619720 276.174