Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02916 ATGGAACTAATTGATATCGAGATTTCTCCCGGAAGAGATGTTGTAGAGAGTTTCATTAACTTGGCTCAATCTCAACAAGCTGGAATCACCGTGTTGAGTGGTTCTGGTCTTGTATCCGATGTTACCATTCTCCTTCCAGAAGCACGTGTCATCGATTTTCCTCTTGAAGGACAGTTTAATATGATATCTCTCAAGGGAACTTACTTAAATCCTAATATTGATCAGCCTTCTCCCTCATTGTTGAGTATTACCTCATCAAATGCAAATTTTTCCATTTTTGTCTCTAGCGGCAACCAAGGACAAGTTTTTGGTGGAAAAGTTAAAGGAAAGATTATGGCCGCAAGCGTTGTTAAGATTACTGCTGCTCTTTTTAAGAATCCTGAATATCATAGGTTGGGCAATATTGTTGGAAGTCCTCACGAGATGAAAGATGATAGACTGCCCAAAATTAATACTGATCGTTCTGAACATGAGTCCCAAAACTTCACCAATACCAATAATTAA 504 0.3849 MELIDIEISPGRDVVESFINLAQSQQAGITVLSGSGLVSDVTILLPEARVIDFPLEGQFNMISLKGTYLNPNIDQPSPSLLSITSSNANFSIFVSSGNQGQVFGGKVKGKIMAASVVKITAALFKNPEYHRLGNIVGSPHEMKDDRLPKINTDRSEHESQNFTNTNN 167
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02916 167 ProSiteProfiles PPC domain profile profile. 1 151 IPR005175 -
Vivi7g02916 167 Gene3D - 2 146 - -
Vivi7g02916 167 Pfam Plants and Prokaryotes Conserved (PCC) domain 6 125 IPR005175 -
Vivi7g02916 167 MobiDBLite consensus disorder prediction 137 156 - -
Vivi7g02916 167 SUPERFAMILY AF0104/ALDC/Ptd012-like 4 132 - -
Vivi7g02916 167 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 6 133 IPR014476 GO:0003680
Vivi7g02916 167 CDD DUF296 6 116 IPR005175 -
Vivi7g02916 167 MobiDBLite consensus disorder prediction 135 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02916 Vivi-Chr7 93612858 93613361 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02916 1 132 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.075 1.80e-20 83.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02916 - - vvo:131619720 318.161