Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02913 ATGTCTTCATCGGAACCTGATTACGAAATCCCGCCGGCTCCTACATACCGGACCCCACCGGCCCTAGTAGCCTTCACCCTCACCGTCCTCATATTAGCCTTTGTGGCTTTCAGCATTGTGTATCTTTGTAAGTATTGTTTTCAAGGCCTTTTCAACACTTGGGCCTTACAACGCACAACCTCGGGTTCCCTCGTACGTCTTTCGCCCGAGCGATCGCCGCCTAGAGGACTCGACAATACCCTTCTAGATAAATTCCCTACTTTTGTTTACTCCTCTGTGAAAGATCTACGTGAGGAAAAGAGTTACAGCTTAGAATGCGCGATTTGTTTGCTCGAGTTTGAGGATGATAGCATGCTTCGTCATCTAACCATTTGTTGCCATGTTTTCCATCAAGAATGTATTGATTTATGGCTTGAATCTCATAAGACATGTCCGGTTTGTCGAACCGACCTCGATTTAAATCCGACTTTAAAACACGGAGACAATGACAATGACAACGACAACAACAATAACAACAACAATGACACCGTTGGTGCAGACGAGGGCAATGTACATTTACCATGCGATGCTATACGTATTGATGTTGGAGAAGAGGAAAGAGACACTGTTGGTGAGATCACTGGAGCTCAAATAAATGCAACAGGCCAACATGATTGTGAGAATTCGAGCATGCCACGAGGCGAAGAACCTAGGTTTTCGAAGTCGCATTCGACGGGGCATTCTATAGTAATGATTAGAGGTGAAGAGAAAGATGATGCAAAATATACATTGAGATTGCCTCAACATGTTATGAGAGTAGGGCACAGCAGCTCTAAGAGTTGTACAACTTATAATGAAATGGCATTGATAGAGCCTACACCTTGTAGTAATTGTGGTTTTGTTAAACCAGTAGCTGGCTCCTCTTCACTTGCTCATCATACTCAAGAAGCGTGA 933 0.4405 MSSSEPDYEIPPAPTYRTPPALVAFTLTVLILAFVAFSIVYLCKYCFQGLFNTWALQRTTSGSLVRLSPERSPPRGLDNTLLDKFPTFVYSSVKDLREEKSYSLECAICLLEFEDDSMLRHLTICCHVFHQECIDLWLESHKTCPVCRTDLDLNPTLKHGDNDNDNDNNNNNNNDTVGADEGNVHLPCDAIRIDVGEEERDTVGEITGAQINATGQHDCENSSMPRGEEPRFSKSHSTGHSIVMIRGEEKDDAKYTLRLPQHVMRVGHSSSKSCTTYNEMALIEPTPCSNCGFVKPVAGSSSLAHHTQEA 310
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02913 310 MobiDBLite consensus disorder prediction 215 238 - -
Vivi7g02913 310 SMART ring_2 106 147 IPR001841 -
Vivi7g02913 310 MobiDBLite consensus disorder prediction 158 183 - -
Vivi7g02913 310 ProSiteProfiles Zinc finger RING-type profile. 106 148 IPR001841 -
Vivi7g02913 310 PANTHER RING FINGER DOMAIN-CONTAINING 15 156 - -
Vivi7g02913 310 Pfam Ring finger domain 105 148 IPR001841 -
Vivi7g02913 310 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 66 153 IPR013083 -
Vivi7g02913 310 FunFam E3 ubiquitin-protein ligase ATL6 66 154 - -
Vivi7g02913 310 SUPERFAMILY RING/U-box 81 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02913 Vivi-Chr7 93567468 93568400 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02913 20 283 Rapid Response to Elicitors AT2G35000 34.572 9.49e-39 139
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02913 - - gmx:100815505 317.775