Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02912 ATGGCAAATAATGTATTTTCTCCAAGATCTCCCTCCTTTGACAGGCGCATTAGTTACCCTGAAGATCTCTCAGAGGATCTAGCCACACCTTTCTCCAAGAGATCCAGGGGTAGACCTAAAGGCTCCAAGAACAAACCTACACCACCTACCATGATCATGGTAGACCCTGAAACCTTCATGGAACCTATTCTTATTAAAATTCCTGTTGGAAAAGATGTCATCGAGTCGATAAGAAAGACAACACGTTGTCATCAAGCTGATATATTAGTGTTGAGAGGTTCTGGTCTTGTCTCTGAGGTTACACTTCTCAACTCGGCGTCTCTAAACTCTCCATTCACTATCAGAGGAAACTTGCAAATGACATCTCTTACTGGAACTTACTTTAATCCAGATTCTGATCGTGTTCCTTCGGAGTTTGTCGTCGACCCTGCATATTCTTCTTTTACCATTTTCTTGTCTGATAATCATGGTCAAGTATTTGGTGGAGTTGTTAGAGGAAAGGTTAGGGCTGCAAGTGTTGTTTTGATTTCTGCCACTCTTTGTAGGAAGCCAAAGTTTTATAGGATGACCTCCAACAATGGAAACCACCGTGAAGATAAAAAGGTTGATCCAAGACTTGATGGTGCTGTCGTCCATAATGATGTTGTTCCACAACATAACGACAAAAACAACATTGCCAATGTGTCCAATGCTCATGCACTGGCACAACCCCACTTTTACTAA 723 0.4177 MANNVFSPRSPSFDRRISYPEDLSEDLATPFSKRSRGRPKGSKNKPTPPTMIMVDPETFMEPILIKIPVGKDVIESIRKTTRCHQADILVLRGSGLVSEVTLLNSASLNSPFTIRGNLQMTSLTGTYFNPDSDRVPSEFVVDPAYSSFTIFLSDNHGQVFGGVVRGKVRAASVVLISATLCRKPKFYRMTSNNGNHREDKKVDPRLDGAVVHNDVVPQHNDKNNIANVSNAHALAQPHFY 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02912 240 MobiDBLite consensus disorder prediction 1 53 - -
Vivi7g02912 240 Pfam Plants and Prokaryotes Conserved (PCC) domain 62 178 IPR005175 -
Vivi7g02912 240 Gene3D - 62 199 - -
Vivi7g02912 240 ProSiteProfiles PPC domain profile profile. 57 201 IPR005175 -
Vivi7g02912 240 SUPERFAMILY AF0104/ALDC/Ptd012-like 60 193 - -
Vivi7g02912 240 CDD DUF296 62 176 IPR005175 -
Vivi7g02912 240 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 203 IPR014476 GO:0003680
Vivi7g02912 240 MobiDBLite consensus disorder prediction 15 33 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02912 Vivi-Chr7 93563353 93564075 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02912 33 189 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 35.220 1.99e-25 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02912 - - vvo:131619714 382.874