Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02911 ATGAAGATGGCATGGCATCTTCAAGCTGATATATTAGTGCTGAGAGGTTCTGGTCTTGTCTTCGAGGTTACGCTTCTCGACACGGCCTCCCTAAACTCTCCATTCACTATTAGAGGAAACTTGCAAATGACATCATTTACTGGAAGTTATTTTAATCCAAATTCTGATCGTGTCCCTTCGGAGTTCGTCCTCGGCTCTGCTTATTCTTTTACCATTTTTCTTTTTGGTAATCATGGTCAAGTATGTGGCGGAGTTGTTAGAGGAAATGTTAGGGCTTCAAGTGTTGTTCTGATTTCTTCCGCTCTTTGTAGGAAGCCAAAGTTTTATAGGGTGCCCTCTAACAAGGGAGACATGCGTGTGGTTAAAAAGGTTGATCCAAGACTTGATGGTGTTGTCGACCATAATGTTGTTGTTCCACAACATAACAACAAAAAGAACATTGCTAATGTGTCTAATGCTCTTGCACTGACAGAACCCCACTTTTACTAA 489 0.4131 MKMAWHLQADILVLRGSGLVFEVTLLDTASLNSPFTIRGNLQMTSFTGSYFNPNSDRVPSEFVLGSAYSFTIFLFGNHGQVCGGVVRGNVRASSVVLISSALCRKPKFYRVPSNKGDMRVVKKVDPRLDGVVDHNVVVPQHNNKKNIANVSNALALTEPHFY 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02911 162 Pfam Plants and Prokaryotes Conserved (PCC) domain 8 97 IPR005175 -
Vivi7g02911 162 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 3 118 IPR014476 GO:0003680
Vivi7g02911 162 SUPERFAMILY AF0104/ALDC/Ptd012-like 11 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02911 Vivi-Chr7 93540745 93541233 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02911 11 115 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 31.193 1.98e-07 47.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02911 - K10127 vvo:131619715 328.176