Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02908 ATGGCAGATAATATCTTTTCTCAAAGATCTCCCTCCTTTGACAGGTGCATCAGTCACCCTGAAGAACTCTTAGAGGATCTAACCACACCTTTCTCGAAGAGATCCAGGGGTAGACCTAAGGGCTCCAAGAATCAACCTAAACCACCTACCATGATCAGGGTAGACCCTGAAAACTTCATGGAACATATTTTTATTGAAATCCCTGCTGGAAAAGATGTCATCGAGTCGATAATAAAGATGGCATGGCGTCATCAAGTTGATATATTAGTGTTGAAAGGTTCAGGTCTTCTTTCGGAGGTTACGCTTCTCAACTCGGCGCCCCTAAACTCCCCATTCACTATCAGAGGAAACTTGCAAATGACATCTCTTACTGGAACTTATTTTAATCCGAAATCTGATCGTGTTCCTTCAGAGTTTGTCCTCGACCATGCTTATTCTTCTTTTACCATTTTCCTATCTGGAAATCATGGTCAAGTATTTGGTGGAGTTGTTAGAGGAAAGGTTACGGCTTCAAGTGTCGTTCGGATTTCCGCTGCTCTTTGTAGGAAGCCAAAGTTTTATAGGGTGGCCCCCAACAATGGAGAAATACGTGAGGATAAAAAGGTTGATCCAAGACTTGGCGGTGCTGTCGTCCATAATGATGTTGTTCTAGAACATAACAAAAAAAATAACTTTACCAATGTGTCCAATGCTTATGCACTGGCACAACCCCCCTTTTACAAATAA 726 0.4201 MADNIFSQRSPSFDRCISHPEELLEDLTTPFSKRSRGRPKGSKNQPKPPTMIRVDPENFMEHIFIEIPAGKDVIESIIKMAWRHQVDILVLKGSGLLSEVTLLNSAPLNSPFTIRGNLQMTSLTGTYFNPKSDRVPSEFVLDHAYSSFTIFLSGNHGQVFGGVVRGKVTASSVVRISAALCRKPKFYRVAPNNGEIREDKKVDPRLGGAVVHNDVVLEHNKKNNFTNVSNAYALAQPPFYK 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02908 241 ProSiteProfiles PPC domain profile profile. 57 205 IPR005175 -
Vivi7g02908 241 CDD DUF296 63 173 IPR005175 -
Vivi7g02908 241 MobiDBLite consensus disorder prediction 27 52 - -
Vivi7g02908 241 SUPERFAMILY AF0104/ALDC/Ptd012-like 59 190 - -
Vivi7g02908 241 Gene3D - 60 216 - -
Vivi7g02908 241 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 15 26 202 IPR014476 GO:0003680
Vivi7g02908 241 Pfam Plants and Prokaryotes Conserved (PCC) domain 63 179 IPR005175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02908 Vivi-Chr7 93495864 93496589 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02908 24 189 AT-hook Motif Nuclear Localized (AHL) Family AT5G49700 34.320 1.72e-26 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02908 - - vvo:131619714 488.034