Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02904 ATGGAAGAATCGGGTGAGTTGCAAACGGAAGAAAATAAAGTCTCTATGGAGAAAACTACGAAAAGAAAGCTCAAAACGCCTGCGCAGCTTAAGGGTCTGGAGAATTTTTATACTGAGCACAAATATCCGACGGAGGAGTTGAAATTAGTAATTGCTGAGGAGTTAGGGTTGACAGAAAAGCAAGTGTCTGGATGGTTTTGCCATCGGAGGTTAAAAGATAAGAGACTGTCGAAAGATGAATCAGCTGCTAATGGACGACAAGATCGTTCGAGTGGTGTCATCCAGGATCGTGGAAGTGGACTCGGGCAAGGGCAAGATTCATGTGGAAGCAGTAAACATGGTGATTATAAGTATCTGGATCCTAAAGAAGTTGAGAGTCACGGCCTTTATAATCGTGATTTGTCAGTTGCTGATATGACCTATGGACGTAGGAATCATTTTTCTGAAAATGTTAGTGGAATGGACGATACGTCATCTGAGAGTAGCTCTTATTTGCAGGAACGGTTGTATCCTCAAGGCCAGGGTCCATATGAGATGGAGCCTTCTAGATATTTAGCATCTGGTAAATCACTTCCACCCTTGAAACCGAAGGGTGCGATGAACATGGGATATAAACCATCGGGGTATTTGAAAGTGAAGGGTGAGATAGAGCATGCTGCTATAACTGCTGTTAAGAAGCAATTAGGAAGGAATTATCTGGAAGATGGTCCACTACTGGGCGTGGAATTTGATCCACTTCCTCCAGGGGCCTTTGAATGCCAAACCCAAGATCCAGTTCCCGAACCATACCGTTTTGCTGATCCTGCTCTTCTCAAATCTCCAGAAATCTCCACAGCAAAAAGACGACCTGGTCTTAGCTCCAAATACGATTCATATTACACTAAACATAGTTCTCAAGATACTCATATGGAAGGAGATGATGACTTTGGTTCCTTGCGTGATTCGGATATTCACGATAAACAAGATAGGGAAGCTTTCCATGGTACAAAACACCGACAAACTTTTCAGAATAATGCCGCCCGTGTTCCTGCCAGGAACTCTTCCTTGGATTTGTACGAAGACTCAACCGGAGAAGCTGCTTATAATATCACTAAGAATCATAGGAAAGACACCAAGCGCGGTGTCGAGGGGATGAGATCTGATTCTGCTTCTAACCATAGTGATCACTATGAAGAAAACATTCCAGTTAAACATGCAGACTTTCTGCCATACGACTATGAAAACACCAATCCAAAGAACATGCAAAGGAATGTTCATGCAGAGTTTTTGCAATATGACTATGACAACGTCAACCCAAAGAATGCGCAAAGGAGTGAACGTGAATACGTAAAAACAAAACCTTCAAACTCAATCCGTAATTCTCGTGGATCCGCTGATACTGAAGAAAGAGAGCTATCTACTAGGATGACTAAGGAAGAGATGTTCAAGACAGAAAGGAAGGCAAAAAAGCAATTTCGCGATACGGGTGGAGCAGTGATGCTTTCAAACGAAACTATGGTTGCAAAACGACTCAAACCCAATACGTTTCTACCATACAACGCGAATCAATTTTCTGCTGCTGAAATAGAACCAAGGAAAATTCAGAGGTCTGGCGCAGAGATGCCGTCTAGCTTTAGCGAGGACGAAACCGGCGATACAAGTTCCTCGTTGAATTGA 1656 0.4293 MEESGELQTEENKVSMEKTTKRKLKTPAQLKGLENFYTEHKYPTEELKLVIAEELGLTEKQVSGWFCHRRLKDKRLSKDESAANGRQDRSSGVIQDRGSGLGQGQDSCGSSKHGDYKYLDPKEVESHGLYNRDLSVADMTYGRRNHFSENVSGMDDTSSESSSYLQERLYPQGQGPYEMEPSRYLASGKSLPPLKPKGAMNMGYKPSGYLKVKGEIEHAAITAVKKQLGRNYLEDGPLLGVEFDPLPPGAFECQTQDPVPEPYRFADPALLKSPEISTAKRRPGLSSKYDSYYTKHSSQDTHMEGDDDFGSLRDSDIHDKQDREAFHGTKHRQTFQNNAARVPARNSSLDLYEDSTGEAAYNITKNHRKDTKRGVEGMRSDSASNHSDHYEENIPVKHADFLPYDYENTNPKNMQRNVHAEFLQYDYDNVNPKNAQRSEREYVKTKPSNSIRNSRGSADTEERELSTRMTKEEMFKTERKAKKQFRDTGGAVMLSNETMVAKRLKPNTFLPYNANQFSAAEIEPRKIQRSGAEMPSSFSEDETGDTSSSLN 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02904 551 MobiDBLite consensus disorder prediction 86 110 - -
Vivi7g02904 551 CDD homeodomain 21 75 IPR001356 GO:0003677
Vivi7g02904 551 MobiDBLite consensus disorder prediction 523 551 - -
Vivi7g02904 551 MobiDBLite consensus disorder prediction 532 551 - -
Vivi7g02904 551 SUPERFAMILY Homeodomain-like 16 81 IPR009057 -
Vivi7g02904 551 ProSiteProfiles 'Homeobox' domain profile. 16 76 IPR001356 GO:0003677
Vivi7g02904 551 MobiDBLite consensus disorder prediction 1 26 - -
Vivi7g02904 551 MobiDBLite consensus disorder prediction 7 26 - -
Vivi7g02904 551 MobiDBLite consensus disorder prediction 431 468 - -
Vivi7g02904 551 Gene3D - 9 92 - -
Vivi7g02904 551 MobiDBLite consensus disorder prediction 296 315 - -
Vivi7g02904 551 MobiDBLite consensus disorder prediction 368 388 - -
Vivi7g02904 551 MobiDBLite consensus disorder prediction 172 199 - -
Vivi7g02904 551 PANTHER HOMEODOMAIN-LIKE SUPERFAMILY PROTEIN 1 550 - -
Vivi7g02904 551 Pfam Homeodomain 21 75 IPR001356 GO:0003677
Vivi7g02904 551 SMART HOX_1 18 80 IPR001356 GO:0003677
Vivi7g02904 551 MobiDBLite consensus disorder prediction 76 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02904 Vivi-Chr7 93330667 93334721 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02904 3 551 Homeobox Transcription Factor Family AT4G03250 40.107 2.80e-79 256
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-other Vivi7g02904 Homeodomain 7e-15 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02904 - - gmx:100803515 728.398
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02904 7 93330667 93334721 Vivi7g02904 7 93330667 93334721 ECH