Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02893 ATGAATATTCCTTCTTTCACCTTTGTTCTCTATACCTTCTTTCTTTTCTCTACTCTTTCTCTTTCTTCATCTCTTCCTATCTCTTTGAAAACTCAAGCTTCAATCTTAGTTTCTCTCAAACAAGATTTCCAATCCAAAACCTCTTTACAAACATGGAACATCTCTAACTACATGTCCCTTTGTACATCTTGGTATGGTGTCCAATGTAACACAAACAACACTTCTGTTGTTTCACTAGACATCTCAAACTTGAATGTTTCTGGAACCTTCTCATCTTCCATCACAAAGCTAACAACCTTGAGGTACCTCAATATATCAAACAACATGCTCAATGGAAACCTAACTTGGAAATTCTCAAAGCTCAAAGAGCTTGAGATTTTCGATGCTTACAACAATGAGTTCAATTCTTCACTTCCTATTGGAGTCACTGAGTTACATAGTCTCAAGTACTTGAATCTCGGCGGAAACTTTTTCCATGGAGAGATTCCTGCAAGATATGGAAGCATGTTGAGTTTGGAATATCTGTCTCTTGCAGGTAATGATTTGAGAGGTTTCATACCTTTTGAGCTTGGAAATCTTAGTAACTTGACACATCTGTTCTTAGGTTATTACAATGAGTTTGAAGGTGAGATTCCAAATGATTTTGGTAAACTTGATAATTTGGTTCATCTTGATCTTGCTAACTGTGGTTTGAAAGGTGAAGTTCCACATGAGTTAGGAAAATTATACAAACTAGACACACTTTTCTTGCAAACCAATCAACTTAGTGGTTCAATTCCTTGTGAGTTAGGGAATTTGACTAGTTTGAAATCTCTTGATTTGTCGAATAACGAGTTGATTGGAAATATACCGAATGAGTTTTCGAATCTTCATAAACTCACACTCTTGAACTTGTTCATCAACAAACTTAATGGTGATATTCCATCTTTTGTTTCTGAGTTACCGAATTTGGAAGTGTTGAAGCTTTGGCATAACGGTTTCGAAGGTTCTATTCCTTCGAAGCTTGGAGAGAATGGTAAATTGACTGAGCTTGATTTATCGACGAACAAGCTCACTGGATTAGTTCCTAGATCTTTATGCATTGGTAAGAAGCTCAAGATTTTGATTTTACTCAACAATTTTCTGTCTGGTTCTTTGCCTAATGAGCTTGGTGAATGTTACACACTTGAGAGAGTTCGTTTAGGACAAAACAATTTAACAGGTTCGATACCGAAAGGCTTGCTTTATTTGCCTGAGATTTCACTTCTTGAACTACAGAACAATTTTCTCAGTGGTTTTCTTGCACAGCAAGAAATCACAAGCACAAACAGTTCTAAACTCGGAGAGATAAATCTGTCGAACAATCGTTTATCTGGATCTCTCCCGAGTTCTATTGGAAATTTTCCGAATTTGCAGATTCTGCTTCTTCATGGAAATAGATTCTCAGGTGAAATTCCTCAAGATATAGGAAAGTTGAAGAACATTCTAAGGTTGGATGTGAGTTTCAACAACTTTTCAGGAAAAATTCCTATTGAGATAGGTGATTGTTTTTCACTTACCTATTTAGATTTGAGTCAGAATCAATTATCAGGTCCTATTCCAATTCAGGTTTCACAAATTCACATACTTAACTATCTTAATGTGTCATGGAACAATCTCAACCAAACACTCCCTAAGGAACTTGGTTCTATTAAGGGCCTAACTTCAGCTGATTTCTCTCATAACAATTTCTCTGGCTCAATTCCTGAAATAGGACAATTCTCAGTGTTCAATTCTACTTCCTTTATCGGTAATCCGAAGTTATGCGGTTATGAATTGAGTCCATGCAACCGTTCATCATCAGAAACACCCGAGTCTCCGAATCAAGAAAACGGTCGTGCGAAACGTGGAATTCTGGCAAAGTATAAGCTTCTATTTGCATTAGCACTTTTGGTTTGTTCGTTGGTTTTCGCGACGTTTGCTGTAATCAAAAGTCGAAAAGGAATTCGGAAGGACTCAAATTCATGGAAGTTAACAGCATTTCAGAAGATTGAATATGGAAGTGAAGACATATTAGGCTGTGTAAAAGAAAGTAACATCATAGGAAGAGGTGGAGCTGGTGTTGTATATGGAGGAACAATGCCTAATGGAGAAAAAGTAGCTGTGAAAAAGTTGTTAGGAGTTAACAAAGGTTGTTCTTATGATAATGGTTTATCAGCTGAAATAAAAACACTTGGTAGAATAAGGCATAGATACATTGTGAAGTTGTTGGCATTTTGTTCAAATGGAGACACTAATTTGCTTGTTTATGAGTATATGACAAATGGAAGTTTAGGTGAAGTGTTGCATGGAAAAAGAGGGGGGTTTCTTGAGTGGGAAGTTAGAGTGAAAATAGCAAGTGAAGCTGCTAAAGGACTTTGCTATTTGCACCATGATTGTTGTCCTTTGATAGTTCATAGAGATGTTAAGTCAAATAATATTTTGTTGGATTCTGAACTTGAAGCTCATGTTGCTGATTTTGGACTTGCTAAGTTTTTGTTGCAAGAGAATGGTGGCACTTCTGAATGCATGTCTTCTATTGTTGGTTCTTATGGATACATCGCTCCAGAATATGCATACACATTGAAAGTGGATGAGAAAAGTGATGTATATAGCTTTGGAGTGGTGTTACTAGAGTTATTGACAGGGAGAAGACCAGTGGGAGATTTTGGTGAAGATGGAATGGATATTGTTCAATGGACAAAGTTACAAACAGATTGGAACAAAGAAAGTGTGGTGAAGATTCTTGATGGAAGGTTACATCAAATTCCTATAGAGGAAGCAATGCATATATTCTTTGTGGCTATGTGTTGTGTTGAAGAACAAAGTGTGGAAAGACCAACTATGAGGGAAGTTGTTGAAATGCTAGCACAAGTAAAGCAACCAAATATCTTTCATGTGTAG 2901 0.3671 MNIPSFTFVLYTFFLFSTLSLSSSLPISLKTQASILVSLKQDFQSKTSLQTWNISNYMSLCTSWYGVQCNTNNTSVVSLDISNLNVSGTFSSSITKLTTLRYLNISNNMLNGNLTWKFSKLKELEIFDAYNNEFNSSLPIGVTELHSLKYLNLGGNFFHGEIPARYGSMLSLEYLSLAGNDLRGFIPFELGNLSNLTHLFLGYYNEFEGEIPNDFGKLDNLVHLDLANCGLKGEVPHELGKLYKLDTLFLQTNQLSGSIPCELGNLTSLKSLDLSNNELIGNIPNEFSNLHKLTLLNLFINKLNGDIPSFVSELPNLEVLKLWHNGFEGSIPSKLGENGKLTELDLSTNKLTGLVPRSLCIGKKLKILILLNNFLSGSLPNELGECYTLERVRLGQNNLTGSIPKGLLYLPEISLLELQNNFLSGFLAQQEITSTNSSKLGEINLSNNRLSGSLPSSIGNFPNLQILLLHGNRFSGEIPQDIGKLKNILRLDVSFNNFSGKIPIEIGDCFSLTYLDLSQNQLSGPIPIQVSQIHILNYLNVSWNNLNQTLPKELGSIKGLTSADFSHNNFSGSIPEIGQFSVFNSTSFIGNPKLCGYELSPCNRSSSETPESPNQENGRAKRGILAKYKLLFALALLVCSLVFATFAVIKSRKGIRKDSNSWKLTAFQKIEYGSEDILGCVKESNIIGRGGAGVVYGGTMPNGEKVAVKKLLGVNKGCSYDNGLSAEIKTLGRIRHRYIVKLLAFCSNGDTNLLVYEYMTNGSLGEVLHGKRGGFLEWEVRVKIASEAAKGLCYLHHDCCPLIVHRDVKSNNILLDSELEAHVADFGLAKFLLQENGGTSECMSSIVGSYGYIAPEYAYTLKVDEKSDVYSFGVVLLELLTGRRPVGDFGEDGMDIVQWTKLQTDWNKESVVKILDGRLHQIPIEEAMHIFFVAMCCVEEQSVERPTMREVVEMLAQVKQPNIFHV 966
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02893 966 Pfam Leucine Rich Repeat 268 290 IPR001611 GO:0005515
Vivi7g02893 966 Pfam Leucine Rich Repeat 340 360 IPR001611 GO:0005515
Vivi7g02893 966 ProSitePatterns Serine/Threonine protein kinases active-site signature. 803 815 IPR008271 GO:0004672|GO:0006468
Vivi7g02893 966 SUPERFAMILY RNI-like 71 412 - -
Vivi7g02893 966 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase 759 965 - -
Vivi7g02893 966 SUPERFAMILY RNI-like 330 583 - -
Vivi7g02893 966 Pfam Protein kinase domain 683 953 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02893 966 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 206 311 - -
Vivi7g02893 966 ProSiteProfiles Leucine-rich repeat profile. 268 290 IPR001611 GO:0005515
Vivi7g02893 966 Pfam Leucine rich repeat N-terminal domain 30 70 IPR013210 -
Vivi7g02893 966 SMART serkin_6 681 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02893 966 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 318 606 - -
Vivi7g02893 966 Gene3D Transferase(Phosphotransferase) domain 1 759 963 - -
Vivi7g02893 966 ProSiteProfiles Protein kinase domain profile. 681 963 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02893 966 Gene3D Ribonuclease Inhibitor 190 311 IPR032675 -
Vivi7g02893 966 Gene3D Ribonuclease Inhibitor 29 189 IPR032675 -
Vivi7g02893 966 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 171 957 - -
Vivi7g02893 966 Gene3D Phosphorylase Kinase; domain 1 664 758 - -
Vivi7g02893 966 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 650 758 - -
Vivi7g02893 966 Gene3D Ribonuclease Inhibitor 312 610 IPR032675 -
Vivi7g02893 966 SUPERFAMILY Protein kinase-like (PK-like) 677 955 IPR011009 -
Vivi7g02893 966 FunFam Leucine-rich repeat receptor-like serine/threonine-protein kinase BAM3 118 205 - -
Vivi7g02893 966 SMART LRR_typ_2 169 193 IPR003591 -
Vivi7g02893 966 SMART LRR_typ_2 266 289 IPR003591 -
Vivi7g02893 966 SMART LRR_typ_2 339 361 IPR003591 -
Vivi7g02893 966 SMART LRR_typ_2 461 485 IPR003591 -
Vivi7g02893 966 SMART LRR_typ_2 218 242 IPR003591 -
Vivi7g02893 966 SMART LRR_typ_2 314 338 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02893 Vivi-Chr7 93135853 93139425 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02893 20 960 Receptor kinase-like Gene Family AT5G65700 56.082 0.0 1040
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi7g02893 Pkinase 1.4e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02893 - - gmx:100816158 1411.74