Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02870 ATGAACTATTTCTACCTAAACAACTCAAAGTGGGTATCAACAGTAGCAAGCATATGGATTCAATGCAGCAGTGGATCACTCTACACTTTCTCAATCTACTCCCAAACTCTCAAGTCAACGCAGCACTACGATCAGTCAACGCTCGACACCGTTTCTGTTTCCAAAGACATAGGAGCCAACATCAGTGTCCTGTCTGGTCTCTTGTACGATTTCCTTGCAACCAGAACATCAAATGGGCCGTGGATTGTTCATTTATTGGGCTCAGCCCAATGCTTCTTGGGCTATTTTCTCATGTGGGCTGCTGTCTCCGGTCTCCTTCCGCCGGTGCCTCTGCCGCTCATGTGCCTCTTTATGCTTGTGGCGGCTCATGGTCAGAGTTTCTTTAACACTTCTAATGTTGTCACTGGTGTTCATAACTTCCCTAATTATAGTGGAACCATCGTTGGTATCTTGAAGGGATTTCTTGGTCTAAGTGGAGCAATATTAATTCAAGTGTATAGAACAATATTCAACAACAACCCTGTGTCATACCTGCTTATGCTATCACTCTTACCACCTATCAACACTTTGATGCTTATGTGGTTTGTAAGAATCCATAACACTCATCATGAGGGAGAATCAGAAAAGAAGTATCTCAACATATTTTCTTTGATGTCTCTAGTTATTGCTGCATATCTTATGATTGTTATAATCCTGGAGAATATCCTTAGTCTACAATTATCGATCCACATTCTTACATTCGTCGTGCTTATGGTGTTACTGGCCTCACTTCTTTTCGTCGCATTTAATGCAAATGAAAATAGGGCTTTCAATAATGCTTCAGAAAGTTTTCTTGCTGAAGGGTCTAATAACCCTTTATTAGTCGGCGATACAAACAATCGAAGGAGAGTGCAACAGGGAGAAAACCTGAATCTTTTCGAAGCAGTGAAAACGGTGAACTTTTGGATTTTGTTTATTTCTATGGCATGTGGTATGGGATCAGGACTCACAACCGTTAACAATATCAGCCAAATAGGAGAGTCCCTTGGCTATTCAACTGTCGAAACAGGTTCATTGGTTGCTTTGTGGAGTATTTGGAATTTTCTTGGCCGCTTTGGAGCTGGTTATGTGTCGGATTATTTCTTACACGCGAAAGGATGTGCAAGACCATTTTTTATGGTGATCACTTTGATGGTTATGAGCATTGGTCATGTCGTAATTGCTTATGGACTTCCAGGCGCTCTATATGTCGGTTCGATATTGATCGGTATTTGTTATGGCTCTCAGTGGTCCCTAATGCCTACAATCGCTTTTGAGATATTTGGTGTAAGACATATGGGCAGCATATTCAACACCATTACTATGGCAAGTCCAGTGGGGTCTTATATATTCTCTGTAAGAGTTCTTGGTTATATGTATGATAAAGAAGCATCAGAAGAAGGAAATATCTGTGTTGGGACCCATTGTTTTATGTTTCCTTTTCTCATCATGGCTTCTGCCACTATTTTGGGTTCTCTGATAGCTTTGTGTTTGTTTTTGCGGACTCGAAGCTTTTATGGTCTAGTTGTTCTTAGAAGAATTCAGAATACTGTGCGATGA 1578 0.4081 MNYFYLNNSKWVSTVASIWIQCSSGSLYTFSIYSQTLKSTQHYDQSTLDTVSVSKDIGANISVLSGLLYDFLATRTSNGPWIVHLLGSAQCFLGYFLMWAAVSGLLPPVPLPLMCLFMLVAAHGQSFFNTSNVVTGVHNFPNYSGTIVGILKGFLGLSGAILIQVYRTIFNNNPVSYLLMLSLLPPINTLMLMWFVRIHNTHHEGESEKKYLNIFSLMSLVIAAYLMIVIILENILSLQLSIHILTFVVLMVLLASLLFVAFNANENRAFNNASESFLAEGSNNPLLVGDTNNRRRVQQGENLNLFEAVKTVNFWILFISMACGMGSGLTTVNNISQIGESLGYSTVETGSLVALWSIWNFLGRFGAGYVSDYFLHAKGCARPFFMVITLMVMSIGHVVIAYGLPGALYVGSILIGICYGSQWSLMPTIAFEIFGVRHMGSIFNTITMASPVGSYIFSVRVLGYMYDKEASEEGNICVGTHCFMFPFLIMASATILGSLIALCLFLRTRSFYGLVVLRRIQNTVR 525
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02870 525 CDD MFS_Mch1p_like 9 497 - -
Vivi7g02870 525 Pfam Major Facilitator Superfamily 316 509 IPR011701 GO:0022857|GO:0055085
Vivi7g02870 525 SUPERFAMILY MFS general substrate transporter 15 202 IPR036259 -
Vivi7g02870 525 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 11 513 - -
Vivi7g02870 525 Pfam Nodulin-like 10 261 IPR010658 -
Vivi7g02870 525 SUPERFAMILY MFS general substrate transporter 216 509 IPR036259 -
Vivi7g02870 525 Gene3D MFS general substrate transporter like domains 304 515 IPR036259 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02870 Vivi-Chr7 92912339 92919853 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02870 8 522 Nodulin-like Gene Family AT1G74780 54.935 0.0 572
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02870 - - gmx:100814668 775.778