Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02839 ATGGATGTAACTAAATTAGATGGCTTGGAGAACAAGAAAGAAGATGAAGTTGTTCTTCCCGGGTTTAGATTTCATCCAACCGATGAAGAGCTTGTCGGGTTTTATCTTCGGCGAAAAGTCGAGAAGAAGCCTCTTCGTATTGAACTCATCAAAGAAATCAACATCTATAAATACGATCCATGGGATCTTCCAAAACCTAGTACTATGGGGGAGAAAGAGTGTTACTTTTTCTGTCTACGAGGAAGAAAATACAGGAACAGCATAAGGCCAAATAGAGTGACAGGATCTGGATTTTGGAAAGCTACAGGAATTGATAAACCTGTGTATGGTGTTAAAGAGTCACATGGATGCATTGGATTGAAGAAATCTTTGGTTTATTATCGAGGAAGTGCGGGAAAAGGTACTAAAACTGATTGGATGATGCATGAGTTTCGTCTTCCACCGGCTAAAGGAAAAACTGGGAATAATCAACTTGTTAATAATCATAGCAATGATGTTCTTGAAGCTGAAGTGTGGACACTATGCAGAATATTCAAAAGAATCCCATCATTCAAAAAATACACACCAAATTTGAAAAAAGACTCACAACCACCGCCATTTACTCCCACCACCACCAACAACTCTTCATCTTCCAACACATGCAGCTTCGAATCTGATAACACCAATCCATACTCGACTTCGACTTTCACAGACTCGCAACTTGTTCAACAGAATCATGAAACAAAACTATTCTTCAATGGACATGTCGACCAGAGGATTAACCAATCATTTCTAACTCAAGTTCCAACAACTTTGTCTCAATCAAGCTTTTGGAATGAACATCCGAATATGGTCGATGATGAAGTATTCGCAAATGAGAATTGGGATGATCTTAGATCTATGGTTCAGTTTGCCTTTGATCCTTCAAAGGTTTATGATTGTAAAGACTTTAATTAG 936 0.3835 MDVTKLDGLENKKEDEVVLPGFRFHPTDEELVGFYLRRKVEKKPLRIELIKEINIYKYDPWDLPKPSTMGEKECYFFCLRGRKYRNSIRPNRVTGSGFWKATGIDKPVYGVKESHGCIGLKKSLVYYRGSAGKGTKTDWMMHEFRLPPAKGKTGNNQLVNNHSNDVLEAEVWTLCRIFKRIPSFKKYTPNLKKDSQPPPFTPTTTNNSSSSNTCSFESDNTNPYSTSTFTDSQLVQQNHETKLFFNGHVDQRINQSFLTQVPTTLSQSSFWNEHPNMVDDEVFANENWDDLRSMVQFAFDPSKVYDCKDFN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02839 311 MobiDBLite consensus disorder prediction 188 218 - -
Vivi7g02839 311 SUPERFAMILY NAC domain 17 179 IPR036093 GO:0003677|GO:0006355
Vivi7g02839 311 Gene3D NAC domain 27 183 IPR036093 GO:0003677|GO:0006355
Vivi7g02839 311 ProSiteProfiles NAC domain profile. 18 180 IPR003441 GO:0003677|GO:0006355
Vivi7g02839 311 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 15 259 - -
Vivi7g02839 311 FunFam NAC domain-containing protein 35 27 183 - -
Vivi7g02839 311 MobiDBLite consensus disorder prediction 197 218 - -
Vivi7g02839 311 Pfam No apical meristem (NAM) protein 20 146 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02839 Vivi-Chr7 92728920 92731434 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02839 12 180 NAC Transcription Factor Family AT5G39820 60.894 1.95e-74 230
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Vivi7g02839 NAM 8.2e-35 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02839 - - gmx:100784323 411.379