Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02834 ATGATTTTCAAGGTTTTTTCTTTTCTGATTCTACTTGTGTTATGTACTTTTGCTGTGGAAGCCATTTCTGTGAATCACAATCACAATAGTCTGAAGAAGAATGGATCTTCTCTTGCTGCTATAAAGTTTCCTGAACATCCAAGTTTCAATGTTGCTGCTTCTTCTGAGGACACAGATTGTGGCTTTTCAAATTCAGACAAATTTGGAGCTACAATGAAACCAGATGAAGAAGGTGTTGAGCTTTTTCCACTTTCAAATCCACACAAGCAATCAGTGAAGCTTCATTTGAAACACATATCAATGAGCAAAGAAACTGAGCCAAAAAGAAAATCAGTGATTGATTACACAGTAAAGGATTTGACAAGAATTCAAACTCTTCACACAAGGGTCATTGAAAAGAAGAACCAAAACACAATTTCAAGGCTGCAGAAAGCAAATTCAAAGCAGTCATATAAAAAAGAGGTTGCTCCGGTCGCTGCGGCGCCGGAATATTCGACTCAGCTTGTGGCAACTTTGGGATCAGGAGTGAGTCTTGGCTCTGGTGAGTATTTCATGGATGTGTTTATAGGTACACCACCTAAGCATTATTCTCTAATACTTGATACTGGTAGTGACCTTAATTGGATTCAATGTGTTCCTTGCATTGCTTGTTTTGAACAAACTGGTCCTTATTATGATCCTAAAGAATCTAGTTCTTTTGAGAATATAACCTGTCATGATCCTAGATGCAAGCTTGTTTCATCACCAGATCCACCTAGGCCTTGTAAGGATGAGAATCAAACATGTCCTTACTTCTATTGGTATGGTGATAGTTCTAACACAACCGGTGATTTCGCATTGGAGACTTTTACGGTTAATCTCACGAATTCGAATGGAAATTCAGAGTTCAAACATGTTGAGAATGTGATGTTTGGTTGTGGTCATTGGAATAGAGGACTATTCCATGGTGCTGCTGGTTTGTTAGGATTAGGGAGAGGACCTTTGTCATTTGCTTCGCAGCTTCGATCTATCTATGGTCATTCGTTTTCGTATTGTCTAGTTGATAGAAACAGCGACTCGAGTGTTAGTAGTAAGTTGATATTCGGCGAGGATAAGGAACTTCTTGGCCATCCGAATTTGAATTTCACTTCTTTTGTTGGTGGCGAAGAGAATTCGGTTGATACGTTTTACTACGTTGGGATAAAATCGGTTATGGTTGATGGCGAGGCGTTGAGTATACCAGAAGAAACTTGGCGTTTATCGGAAGAAGGTTCGGGTGGTACTATAATTGATTCTGGAACAACTTTAACTTATTTTGCAGAACCTGCTTATGAGATTATCAAAGAGGCTTTTATGAAAAAGATTAAGGGGTATGAAATTGTTGAAGGCTTTCCTCCTCTAAAGCCTTGTTATAATGTTTCAGGAATTGAGAAAATGGAGTTACCTGACTTTGGGATTTTGTTCTCAGATGGAGCAATGTGGGATTTTCCTGTAGAGAATTACTTTATACAGATTGAATCTGATGTTGTTTGTTTGGCTATTTTGGGGACTCCTAGGTCTGCTCTTTCAATTATTGGAAATTATCAGCAACAGAATTTTCATATACTTTATGACATGAAGAAATCGAGACTCGGTTATGCACCGATGAAGTGCACCACAACTTGAATCGGCGGCGAGTAACAATCGGAATCGGTGCTCGTCGGAAAAATGGTTAACGCAAAGTTTCACCAGTACCAGGTCGTCGGAAGGGGTCTTCCTACCGAAACCGATGCGCACCCGAAGATTTACCGCATGAAGCTTTGGGCAACCAATGAGGTTCGTGCCAAATCCAAATTCTGGTATTTCTTGAGGAAGTTGAAGAAAGTGAAGAAAAGCAATGGACAAGTGCTGGCTATCAATGAGATCTTTGAGAAAAATCCCACCAAGATTAAGAACTATGGAATATGGTTGAGATATCAGAGTCGTACAGGTTATCACAACATGTACAAGGAATACCGTGATACTACTCTAAACGGTGCTGTTGAGACGATGTACAACGAAATGGCATCTCGTCATAGAGTCAGGTTTCCATGCATTCAAATTATTAAGACTGCCACCATCCCAGCCAGTCTTTGCAAAAGGGAGAGCACTAAGCAATTCCACAACTCCAAAATCAAGTTCCCGTTGGTGTTTAAGAAGATCAGACCACCTAGCAGGAGCCTAAAAACAACATACAAAGCTAACAGGCCCAACCTGTTTATGTGA 2223 0.4004 MIFKVFSFLILLVLCTFAVEAISVNHNHNSLKKNGSSLAAIKFPEHPSFNVAASSEDTDCGFSNSDKFGATMKPDEEGVELFPLSNPHKQSVKLHLKHISMSKETEPKRKSVIDYTVKDLTRIQTLHTRVIEKKNQNTISRLQKANSKQSYKKEVAPVAAAPEYSTQLVATLGSGVSLGSGEYFMDVFIGTPPKHYSLILDTGSDLNWIQCVPCIACFEQTGPYYDPKESSSFENITCHDPRCKLVSSPDPPRPCKDENQTCPYFYWYGDSSNTTGDFALETFTVNLTNSNGNSEFKHVENVMFGCGHWNRGLFHGAAGLLGLGRGPLSFASQLRSIYGHSFSYCLVDRNSDSSVSSKLIFGEDKELLGHPNLNFTSFVGGEENSVDTFYYVGIKSVMVDGEALSIPEETWRLSEEGSGGTIIDSGTTLTYFAEPAYEIIKEAFMKKIKGYEIVEGFPPLKPCYNVSGIEKMELPDFGILFSDGAMWDFPVENYFIQIESDVVCLAILGTPRSALSIIGNYQQQNFHILYDMKKSRLGYAPMKCTTTXIGGEXQSESVLVGKMVNAKFHQYQVVGRGLPTETDAHPKIYRMKLWATNEVRAKSKFWYFLRKLKKVKKSNGQVLAINEIFEKNPTKIKNYGIWLRYQSRTGYHNMYKEYRDTTLNGAVETMYNEMASRHRVRFPCIQIIKTATIPASLCKRESTKQFHNSKIKFPLVFKKIRPPSRSLKTTYKANRPNLFM 740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02834 740 Gene3D Acid Proteases 364 549 IPR021109 -
Vivi7g02834 740 FunFam 60S ribosomal protein L18a 563 633 - -
Vivi7g02834 740 PRINTS Pepsin (A1) aspartic protease family signature 516 531 IPR001461 GO:0004190|GO:0006508
Vivi7g02834 740 PRINTS Pepsin (A1) aspartic protease family signature 421 432 IPR001461 GO:0004190|GO:0006508
Vivi7g02834 740 PRINTS Pepsin (A1) aspartic protease family signature 189 209 IPR001461 GO:0004190|GO:0006508
Vivi7g02834 740 Pfam Xylanase inhibitor N-terminal 183 362 IPR032861 -
Vivi7g02834 740 SUPERFAMILY Acid proteases 177 545 IPR021109 -
Vivi7g02834 740 FunFam Aspartyl protease family protein 364 547 - -
Vivi7g02834 740 Hamap 50S ribosomal protein L18Ae [rpl18a]. 568 631 IPR028877 -
Vivi7g02834 740 Gene3D - 558 633 - -
Vivi7g02834 740 FunFam 60S ribosomal protein L18a 634 709 - -
Vivi7g02834 740 Gene3D - 634 709 - -
Vivi7g02834 740 CDD pepsin_A_like_plant 182 544 IPR034161 -
Vivi7g02834 740 Gene3D Acid Proteases 160 363 IPR021109 -
Vivi7g02834 740 PANTHER OS07G0603500 PROTEIN-RELATED 137 545 - -
Vivi7g02834 740 FunFam Eukaryotic aspartyl protease family protein 158 363 - -
Vivi7g02834 740 ProSiteProfiles Peptidase family A1 domain profile. 183 540 IPR033121 -
Vivi7g02834 740 Pfam Ribosomal proteins 50S-L18Ae/60S-L20/60S-L18A 569 690 IPR023573 GO:0003735|GO:0005840|GO:0006412
Vivi7g02834 740 Pfam Xylanase inhibitor C-terminal 390 540 IPR032799 -
Vivi7g02834 740 ProSitePatterns Eukaryotic and viral aspartyl proteases active site. 198 209 IPR001969 GO:0004190|GO:0006508
Vivi7g02834 740 SUPERFAMILY RplX-like 633 708 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02834 Vivi-Chr7 92614497 92623724 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02834 562 740 Cytoplasmic Ribosomal Protein Gene Family AT2G34480 88.827 2.33e-114 342
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02834 K22683 - zju:107416111 1063.52