Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02821 ATGGCTAATGAAAATCATGATCCATTCTATCATCACAACAACAACCACCACCATGATGATGATGAACTCAATCACTCTAACTTTTCATTCTCACAAAACTTTCAAGGATTTGAGCATCCTTCTACTCATACTACAACTTTCACTGACTACTTACATGGTTCCATGGACTATAACACTCTCTCTAAAGCCTTTGACTTGTCTTGTTCATCATCTGAAGTGGCTTCTTCCATTAATGATAATAACATGAAGAAATCTAGTGCTGGAGATTCTGAATCATCTTCATCTAATGAAGCTGAAGCTGTCATAGAACAAGACTCAACCAAAAGTGAGAAGAAAGATAAGCAACCTAAATTATTAGGGCCTGAAGATGGAGATGAAAATTCTAAGAAAGAGAAGGTTAAAAAGAAAGAGAAAAAACCAAAAGAACCAAGGTTTGCATTCTTGACTAAAAGTGAGATTGATCATCTTGAAGATGGATATAGATGGAGAAAATATGGACAAAAAGCAGTCAAGAATAGTCCATACCCAAGGAGCTATTATAGATGCACAAGTCAAAAGTGTATAGTGAAGAAAAGAGTGGAAAGATCATACCAAGATCCATCAATTGTGATGACAACATATGAAGGACAACACAACCATCATTGCCCAGCAACACTTAGAGGCAATGCAGCTTCCAACATCTTTTCTTCACCATCTCTCTTTAGTTCCAACTCAATTGGATTTGAACAAAGAATACACCAAGATTTCCTTGCTCAGTTTCTTCCAAGTTATAGCCAAAGTAGTAATCATCAAATGTTCCACCAAAATCTTCCTCTACCATCTCATCATCAACAACAACAACAGCAACAACAACATCAGCAGCAACAACATCAACAACAGCAACATCAACAACATCAGCAGTTTCAACTCCATCACGATAATGGTTTGTTGCAAGATCTACTACTACCATCATCATTTCCGGGAAAACAAGAGCAATGA 978 0.3681 MANENHDPFYHHNNNHHHDDDELNHSNFSFSQNFQGFEHPSTHTTTFTDYLHGSMDYNTLSKAFDLSCSSSEVASSINDNNMKKSSAGDSESSSSNEAEAVIEQDSTKSEKKDKQPKLLGPEDGDENSKKEKVKKKEKKPKEPRFAFLTKSEIDHLEDGYRWRKYGQKAVKNSPYPRSYYRCTSQKCIVKKRVERSYQDPSIVMTTYEGQHNHHCPATLRGNAASNIFSSPSLFSSNSIGFEQRIHQDFLAQFLPSYSQSSNHQMFHQNLPLPSHHQQQQQQQQHQQQQHQQQQHQQHQQFQLHHDNGLLQDLLLPSSFPGKQEQ 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02821 325 FunFam WRKY transcription factor 57 142 216 - -
Vivi7g02821 325 MobiDBLite consensus disorder prediction 74 145 - -
Vivi7g02821 325 MobiDBLite consensus disorder prediction 103 145 - -
Vivi7g02821 325 Gene3D WRKY domain 142 217 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g02821 325 MobiDBLite consensus disorder prediction 9 25 - -
Vivi7g02821 325 MobiDBLite consensus disorder prediction 266 302 - -
Vivi7g02821 325 MobiDBLite consensus disorder prediction 1 27 - -
Vivi7g02821 325 SMART WRKY_cls 156 215 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02821 325 MobiDBLite consensus disorder prediction 74 102 - -
Vivi7g02821 325 PANTHER WRKY TRANSCRIPTION FACTOR PROTEIN 1-RELATED 38 296 IPR044810 GO:0003700
Vivi7g02821 325 SUPERFAMILY WRKY DNA-binding domain 149 216 IPR036576 GO:0003700|GO:0006355|GO:0043565
Vivi7g02821 325 ProSiteProfiles WRKY domain profile. 151 216 IPR003657 GO:0003700|GO:0006355|GO:0043565
Vivi7g02821 325 Pfam WRKY DNA -binding domain 157 213 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02821 Vivi-Chr7 92487003 92489548 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02821 31 221 WRKY Transcription Factor Family AT4G18170 53.846 6.51e-55 180
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Vivi7g02821 WRKY 6.7e-25 CL0274