Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02801 ATGGATTCCAATAAGCTTCAGTCTTGCTTCTCTCTAGTCAGACAATCCTCTCGGGCACCGGACCGTGATGATTCCGTCACCGTCGACGCGCCGGAATCGGTAGCGTTGAATCCAACGGTTCGTTTGATGTATTTAGCAAACGAAGGCGACTTGGAAGCAATCAACGAGCTTTTAGACGACGGCTGTGACGTCAATTTCCGAGACATTGACGGCCGCACCGCTCTCCACATCGCTGCATGTCAAGGACGAACCGACGTTGTTCAGTTGTTGATTCAAAGAGGTGCTGAAGTTGATCCTCAAGATCGTTGGTGTAGCACTCCTCTTGCAGATGCGTTGTACTACAAAAATCATGATGTTGTCAAACTTTTGGAGCAGCATGGTGCAAAACCCCCGGAAGCTCCTATGCATGTCCAAAATGCCCGTGAAGTCCCTGAATATGAGATTGATTCATCTGAACTTGATTTTACAAATAGTGTTTGCATAACAAAGGGAACTTTCCGGAGTGCATTATGGGGTGGAATTCAAGTAGCTGTTAAAACTCTTGGGGAGGAAGTATTCACTGACGATGATAAAGTAAAGGCATTTCATGATGAGCTTACATTACTTCAGAAAGCAAGGCATCCAAATGTCGTCCAATTTTTGGGTGCCGTGACACAAAGCACCCCAATGATGATTGTCACAGAATACCTACCTCAGGGGGATCTTCGTGCCTACTTAAAGCGGAAAGGTGCATTAAAACCATCTACAGTTGTGAAGTTTGCACTTGATATTGCTAGGGGAATGAACTATTTGCATGAGCATAAACCCGACCCCATAATACACCGAGATCTTGAGCCTTCAAATATTCTCCGGGATGATTCTGGACATCTGAAAGTTGCAGACTTTGGAGTTAGCAAGTCACTCAAAATCACCAAAACAGTCAAAGAAGACAGACCTGTGACATGCCAGGATACATCATGGCGGTATGTTGCACCAGAGGTTTACAGAAATGAGGAATATGACACCAAAGTGGACGTGTTTTCTTTTGCTTTGATATTACAAGAGATGATTGAAGGTTGTCCACCATTTTATAGAAAGCCAGAAAATGAAGTTCCTAAAGCATATGTGAAAAATGAGCGGCCACCGTTTAAGGCATCGCCAAAGCGTTATGCTAATGGATTAAAAGAGTTAATTGAGGAATGTTGGGATGAAGAACCCTATAGAAGACCAACGTTTAACAAAATAATAGAGAGGTTGGATAATATCAACCATCATCTTGCTCAAAAGAAGCGCTGGAAGGCTTTGACTCCTTCATGCTTATGGAGTTTGGAGGCCATGTTTAAGGGGTATCCTACAAATCCTGATAGCCCATCAGCTCGCTCTACGGTTAGATAA 1374 0.4367 MDSNKLQSCFSLVRQSSRAPDRDDSVTVDAPESVALNPTVRLMYLANEGDLEAINELLDDGCDVNFRDIDGRTALHIAACQGRTDVVQLLIQRGAEVDPQDRWCSTPLADALYYKNHDVVKLLEQHGAKPPEAPMHVQNAREVPEYEIDSSELDFTNSVCITKGTFRSALWGGIQVAVKTLGEEVFTDDDKVKAFHDELTLLQKARHPNVVQFLGAVTQSTPMMIVTEYLPQGDLRAYLKRKGALKPSTVVKFALDIARGMNYLHEHKPDPIIHRDLEPSNILRDDSGHLKVADFGVSKSLKITKTVKEDRPVTCQDTSWRYVAPEVYRNEEYDTKVDVFSFALILQEMIEGCPPFYRKPENEVPKAYVKNERPPFKASPKRYANGLKELIEECWDEEPYRRPTFNKIIERLDNINHHLAQKKRWKALTPSCLWSLEAMFKGYPTNPDSPSARSTVR 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02801 457 Pfam Protein tyrosine and serine/threonine kinase 171 412 IPR001245 GO:0004672|GO:0006468
Vivi7g02801 457 SMART ANK_2a 103 132 IPR002110 GO:0005515
Vivi7g02801 457 SMART ANK_2a 36 66 IPR002110 GO:0005515
Vivi7g02801 457 SMART ANK_2a 70 99 IPR002110 GO:0005515
Vivi7g02801 457 Pfam Ankyrin repeats (3 copies) 42 130 IPR002110 GO:0005515
Vivi7g02801 457 FunFam Integrin-linked protein kinase family 21 146 - -
Vivi7g02801 457 ProSiteProfiles Ankyrin repeat profile. 70 102 IPR002110 GO:0005515
Vivi7g02801 457 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 106 420 - -
Vivi7g02801 457 PIRSF ILK 3 434 - -
Vivi7g02801 457 ProSiteProfiles Protein kinase domain profile. 155 420 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02801 457 Gene3D - 5 145 IPR036770 -
Vivi7g02801 457 FunFam serine/threonine-protein kinase STY46-like 148 231 - -
Vivi7g02801 457 CDD STKc_MAP3K-like 161 412 - -
Vivi7g02801 457 FunFam Os01g0748600 protein 141 432 - -
Vivi7g02801 457 ProSiteProfiles Ankyrin repeat region circular profile. 70 102 - -
Vivi7g02801 457 SUPERFAMILY Ankyrin repeat 41 131 IPR036770 -
Vivi7g02801 457 PRINTS Tyrosine kinase catalytic domain signature 227 240 IPR001245 GO:0004672|GO:0006468
Vivi7g02801 457 PRINTS Tyrosine kinase catalytic domain signature 266 284 IPR001245 GO:0004672|GO:0006468
Vivi7g02801 457 PRINTS Tyrosine kinase catalytic domain signature 337 359 IPR001245 GO:0004672|GO:0006468
Vivi7g02801 457 PRINTS Tyrosine kinase catalytic domain signature 383 405 IPR001245 GO:0004672|GO:0006468
Vivi7g02801 457 Gene3D Transferase(Phosphotransferase) domain 1 149 421 - -
Vivi7g02801 457 SUPERFAMILY Protein kinase-like (PK-like) 171 434 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02801 Vivi-Chr7 92234208 92239398 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02801 1 427 MAP Kinase Kinase Kinase AT4G18950 65.509 0.0 574
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-5 Vivi7g02801 PK_Tyr_Ser-Thr 8.2e-56 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02801 - - gmx:100795964 748.429