Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02761 ATGAGAAGACCTAAATCCAAGCAGTTTCGCAAACAACAACGACTCTCAGAAGAAGATGAGATTAAGCAGCTGAATTCATGGATTCAGTTCCAGAAACCAGATTCCGGTGTGAACCCAATGTCTCTACCACCTCTCCCCAAAAACTCCCCCGTCGGTCACCTCGGCGACAATATGTTCTCCCGCTACGCCGGCGTGGTGCGGTTTGAGCAGTTGCCACTGTCGAAGAAAACCAAAGACGCATTGCGAGCATGCAAGTTCGTTTCCATGACTGATATTCAAAGAGCTTCTCTTCCTCATGCACTATGTGGCCGTGATGTTCTCGGTGCCGCCAAAACTGGCTCCGGGAAAACACTTGCTTTCATTATCCCAGTTTTGGAGAAATTGTATAAAGAGAGATGGGGACCTGAAGATGGGGTTGGGAGCATAATAATATCACCTACAAGAGAATTAGCTGGTCAGATATTCGAGGTGTTGAATTCTGTTGGGAAGTACCATGGTTTTAGTGCTGGTCTCCTCATTGGTGGTCGTAAGGATGTTGACACTGAGAAAGAACGTGTCAACGAGCTCAACATTTTGATATGCACACCTGGTCGCCTTCTACAACACATGGATGAAACTCCTAATTTTGATTGTTCACAGATGCAGGTGTTGGTACTAGATGAGGCTGATCGTATTCTTGACAGTAAATTCAAGAAGGATCTAAATGCAATCATCTCACAGTTACCAAAACGTAGGCAAACTATGCTTTTCTCAGCAACTCAAACAAAGTCAGTTCAAGATCTTGCAAGGCTAAGTTTGAAGGACCCAGAGTATCTGAGTGTACACGAAGAGTCTGTGGCTGCCACTCCTACTCTCTTGAAGCAAATTGTGATGATTGTTCCTCTGGATCAAAAGTTAGATATGCTGTGGACTTTCATAAAGACCCATCTACAGTTCAGAACAATTGTCTTTCTATCAAGTTGTAAACAGGTAAACTATGTCTATGAGGCATTTAGAAAACTTCACCCTGGCATACCGTTGAAGTGCCTCCATGGGAGGATGAAACAAGAAAAAAGAATGGCAATATATTCCGATTTCTGTGAGAATCGCTCAGTTCTCTTCGCAACTGATGTGGCTGCAAGAGGCCTTGATTTTAATAAAGCAGTTGACTGGGTTGTTCAGGTAGATTGTCCTGAAAATGTAGCATCTTACATACATAGAGTTGGCCGTACTGCTCGTTATAAATCTGATGGAAAGTCAGTTTTATTTCTATTGCCTTCAGAAACTCAAATGATTGAAAAGTTAGAAGCAGCAAAGGTTCCAGTGCATTTACTCAAGCCAAAGAAAGAAAAACTGCAACCAGTGTCCAGCTTGTTGGCATCTTTACTAGTCAAGTACCCAGAACTTCAGCAGCGAGCCCAAAGGGCATTTGTCACCTACTTGAGATCCATCCATCTCCAAAAGGATAAAGAGATCTTTGATATTTTGAAACTTCCTATTGATGAGTATTCAGCATCATTAGGTCTACCGATGACCCCCAAAATCCGTTTTATAAACCAGAAAATTAAATCTAAAGCTTTGTCAACAAAATTAATTTTAGCTGAACCAGTGGATCCAAACCAGGAAAATGTCACAGAAGGTTCTAGAGAAAAGCTAGACACAGTTGTTGTCAGAGACGAGGAAATTGAAAACGATCTTCTTCTACCAGTTGATACCTCAAAGAAAGACGACACAAAGTCAGCTGATATTGGAGATTTAATACCAGCAACTCGTTTATTAAAGAAAAAAAAGCTCAAGATTAATGTGCATAGACCACTTGGGAATCGGGTTGTATTCGATGATGAAGGCAACACACTTCCTCCACTAGCCAGGATTGCTGGCACACAAAGTGGCAAGGATTCATTGCTAATTGATCCAGAACAAAAAGCTGAATACTATAAAAGGATGCGAGAGGATTTGAAGAAGGCAGACAAGGAAGACAAACTTGTAGAGCGTCAGCGACTTAGAGAAAAAAGAATCAAGCAGAAAATGAAATGGAAGGCTGATAATATGGAAGAAGAGGACAACCAAGATGATAACTCTGAGCTAGAAGAAGACGAAACTATAAACAAACGCCATAAAAAGAGTAAAGTATACTTTGATAGTGACAGTGACGAAGGTGGAAGAAAACAAGTCACAGGTAATCAAGGTATTACTTTAGAGGAGCAAGAAGCGTTGGCTTTGAAGTTGTTGCAATCCATGCAAGCATAG 2229 0.4141 MRRPKSKQFRKQQRLSEEDEIKQLNSWIQFQKPDSGVNPMSLPPLPKNSPVGHLGDNMFSRYAGVVRFEQLPLSKKTKDALRACKFVSMTDIQRASLPHALCGRDVLGAAKTGSGKTLAFIIPVLEKLYKERWGPEDGVGSIIISPTRELAGQIFEVLNSVGKYHGFSAGLLIGGRKDVDTEKERVNELNILICTPGRLLQHMDETPNFDCSQMQVLVLDEADRILDSKFKKDLNAIISQLPKRRQTMLFSATQTKSVQDLARLSLKDPEYLSVHEESVAATPTLLKQIVMIVPLDQKLDMLWTFIKTHLQFRTIVFLSSCKQVNYVYEAFRKLHPGIPLKCLHGRMKQEKRMAIYSDFCENRSVLFATDVAARGLDFNKAVDWVVQVDCPENVASYIHRVGRTARYKSDGKSVLFLLPSETQMIEKLEAAKVPVHLLKPKKEKLQPVSSLLASLLVKYPELQQRAQRAFVTYLRSIHLQKDKEIFDILKLPIDEYSASLGLPMTPKIRFINQKIKSKALSTKLILAEPVDPNQENVTEGSREKLDTVVVRDEEIENDLLLPVDTSKKDDTKSADIGDLIPATRLLKKKKLKINVHRPLGNRVVFDDEGNTLPPLARIAGTQSGKDSLLIDPEQKAEYYKRMREDLKKADKEDKLVERQRLREKRIKQKMKWKADNMEEEDNQDDNSELEEDETINKRHKKSKVYFDSDSDEGGRKQVTGNQGITLEEQEALALKLLQSMQA 742
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02761 742 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 294 446 IPR001650 -
Vivi7g02761 742 Pfam Domain of unknown function (DUF4217) 451 508 IPR025313 -
Vivi7g02761 742 SMART helicmild6 325 408 IPR001650 -
Vivi7g02761 742 Pfam DEAD/DEAH box helicase 90 261 IPR011545 GO:0003676|GO:0005524
Vivi7g02761 742 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 97 272 IPR014001 -
Vivi7g02761 742 ProSiteProfiles DEAD-box RNA helicase Q motif profile. 66 94 IPR014014 GO:0003724
Vivi7g02761 742 MobiDBLite consensus disorder prediction 668 725 - -
Vivi7g02761 742 ProSitePatterns DEAD-box subfamily ATP-dependent helicases signature. 218 226 IPR000629 -
Vivi7g02761 742 SMART ultradead3 85 289 IPR014001 -
Vivi7g02761 742 Pfam Helicase conserved C-terminal domain 298 407 IPR001650 -
Vivi7g02761 742 CDD DEADc_DDX10 77 275 - -
Vivi7g02761 742 Coils Coil 639 659 - -
Vivi7g02761 742 Gene3D - 283 525 IPR027417 -
Vivi7g02761 742 Gene3D - 57 278 IPR027417 -
Vivi7g02761 742 SMART DUF4217_3 447 510 IPR025313 -
Vivi7g02761 742 CDD SF2_C_DEAD 286 417 - -
Vivi7g02761 742 MobiDBLite consensus disorder prediction 691 714 - -
Vivi7g02761 742 PANTHER RNA HELICASE 65 567 - -
Vivi7g02761 742 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 138 427 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02761 Vivi-Chr7 91720617 91726124 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02761 48 429 Eukaryotic Initiation Factors Gene Family AT1G72730 26.684 3.45e-34 134