Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02752 ATGGATGGTGTTGTTGTGAGAAGAGTCATACCTTCTGATAACAGTTGTCTCTTTAATGCTGTTGGGTATGTTATGGATCGTGACCAAACTAAAGCTGCTGAGTTGAGACAGGTTATAGCTGCAACAGTAGCAAGTGACCCCGAGAAATATTCTGAAGCATTTCTTGGGAAGCCAAATGCAGAATATTGTAACTGGATTCTTGACCCAGAGAAATGGGGAGGTGCAATTGAACTCTCAATATTAGCAGATTATTATGGACGCGAAATTGCAGCATATGATATCCAAACAACACGGTGTGATTTGTACGGTCAGGAAGGTAACTATTCTGAAAGGGTGATGCTCATATACGATGGTCTCCATTACGATGCTTTAGCTATGTCTCCCGTTGAAGAAGCTCCCGAGGATTTTGATCAGACCATATTTGCCATACAAAATTCCAGAAGCATTGGACCTGTTGAGCAGCTTGCGATAAATTTTATTAAAGACCAACATAGGAAACGGAAATTCACCGACACCGCCAACTTCACTCTGCGCTGTGGGGTATGCCAAATTGGAGTTATTGGTCAGAAGGAGGCAGCGGAGCATGCTCAAGCAACCGGTCATGTTAATTTTCAAGAATATAGATGA 627 0.4242 MDGVVVRRVIPSDNSCLFNAVGYVMDRDQTKAAELRQVIAATVASDPEKYSEAFLGKPNAEYCNWILDPEKWGGAIELSILADYYGREIAAYDIQTTRCDLYGQEGNYSERVMLIYDGLHYDALAMSPVEEAPEDFDQTIFAIQNSRSIGPVEQLAINFIKDQHRKRKFTDTANFTLRCGVCQIGVIGQKEAAEHAQATGHVNFQEYR 208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02752 208 Pfam OTU-like cysteine protease 12 107 IPR003323 -
Vivi7g02752 208 SUPERFAMILY Cysteine proteinases 8 124 IPR038765 -
Vivi7g02752 208 PANTHER HIV-INDUCED PROTEIN-7-LIKE PROTEASE 5 206 - -
Vivi7g02752 208 ProSiteProfiles OTU domain profile. 5 127 IPR003323 -
Vivi7g02752 208 CDD OTU_plant_OTU1_2-like 3 166 - -
Vivi7g02752 208 Gene3D - 1 173 - -
Vivi7g02752 208 FunFam ubiquitin thioesterase OTU1 1 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02752 Vivi-Chr7 91549214 91552754 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02752 1 208 C2H2 Transcription Factor Family AT1G50670 79.327 8.18e-128 357