Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02738 ATGATTTATGGTAGATGTGCTGCCTGCAAGAGTCAAAGAAGAAAGTGTCCTTCTGATTGCATTTTCTCTCCTTATTTCCCTCCCAATGATCCTCAAAGATTTGCTTATGTTCACAAAATCTATGGTGGTAGCAATGTGGGAAAAATGCTTAAGCAATTGCCATATTATGTAAGAGAACATGCTGCAAATAGTTTGTATTTAGAAGCAAAAAGTAGGATTCAAGATCCTGTTTATGGATGTGTTGGAATTATCTCAAAATTGTATCAACAAATTCATGATACAGAAATTGAGTTGGCCAAAATTCAAACTCAGATTGCTTTTCATAAGCTTCAAAATCAACAATTTGAAGATGGATCAAATTTGAAGTTTTTGATGCCACAAAGTAATAGCATGGAGAAGTTTCAATGGCCTAATCAAACTCCTAATTGGTTCAATTAA 438 0.3379 MIYGRCAACKSQRRKCPSDCIFSPYFPPNDPQRFAYVHKIYGGSNVGKMLKQLPYYVREHAANSLYLEAKSRIQDPVYGCVGIISKLYQQIHDTEIELAKIQTQIAFHKLQNQQFEDGSNLKFLMPQSNSMEKFQWPNQTPNWFN 145
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02738 145 Coils Coil 84 104 - -
Vivi7g02738 145 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 5 122 - -
Vivi7g02738 145 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
Vivi7g02738 145 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02738 Vivi-Chr7 91400612 91401212 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02738 5 119 AS2 family AT3G26660 59.130 1.51e-46 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Vivi7g02738 LOB 5.3e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02738 - - lang:109328513 208.764