Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02719 ATGATGATTTTGTTCGTAATTGCACTTCCTCAGGTTGCTGCACTCTTCCAAGACCACCCAGATCTTCTTGATGGGTTTATTCATTTTCTTCCCGATGTTTCCGCAGCTGCCCCTGCTCATACTGTTGCTCGGAATTCTCGGTTTCGAGATAGGAGCTCTGCACTGCATACAATGCGGCAACTGCATATTGAAAGAGCAAACATTATTTTTATGGTGGAGGAGAGATGTTTTGGAGACGGAGCAAACAAATCGCAACATGTGAAATGGATGAAGAGCTTGAGTGGAGTTGGCGATATAAATTCTGATTCTACTATTCTTGGTAAAACTAAGTTGAAGCTCTCAGTGAAAAAAGATTCAAAATACCGAGACTTTTTGAGCATTGCTGAAGGTTACTGGTGTTGA 402 0.4179 MMILFVIALPQVAALFQDHPDLLDGFIHFLPDVSAAAPAHTVARNSRFRDRSSALHTMRQLHIERANIIFMVEERCFGDGANKSQHVKWMKSLSGVGDINSDSTILGKTKLKLSVKKDSKYRDFLSIAEGYWC 133
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02719 133 Gene3D Paired amphipathic helix 6 33 IPR036600 GO:0006355
Vivi7g02719 133 Pfam Paired amphipathic helix repeat 11 30 IPR003822 GO:0006355
Vivi7g02719 133 SUPERFAMILY PAH2 domain 10 32 IPR036600 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02719 Vivi-Chr7 91134481 91138401 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi7g02719 PAH 2.7e-05 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02719 K11644 - vvo:131617816 270.396