Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02685 ATGACAATGTCTCTTCAAATATCAATGATGTTTCTTTTAGTATTGTTTATGAGTTGTTTTTCTATTGGTAGAGCCATAGATTGTGGTGGTAATCAAGTTGCAAACACCATCATTGTTGATCAAGGAGGAAAAGGAGCATTTAAAACAGTCCAAGCTGCCATTGATTCTGTAAAGAATCCAAATGATCGATGGGTTCTAATTAAAATAAATCCTGGTGTATACAAAGAAAAAGTTCTTATACATCCAAGAAAGCCATGCATTATTCTAAAAGGATCTGGTAGTGATAGCACAATCATTACCTACAATGATGCAGCTAATGATATTGGCACATCTAATAGTGCAACATTTCATTCTTCTCCACCTAATGTAATTTTGAGTGGCATTTCATTCAAGAACACACATGGTACTGAAGGACCAGCAGTAGCAGCTTCAATATACGGTGATAAGACTGCAGTTTTCGAATGTAGTTTCACTGGTTATCAAGATACTTTACTTTCATCAAAGCGGCGTCAGTATTTTAAAAATTGTTACGTTGAAGGTGAAGCAGACTTTATTTTTGGAGAAGGTCAATCTTATTTCGAGAATTGTAAGATCAATGCCACTCAAGCCCCATCAAAACCTATAGGTTTTGTCACGGCACAACGTAGAGATTCACCAAAGAGTCCAAATGGTTATGTTTTTAAAGGAGGACGCATCGATGGAAATGGTCAAGTGAATCTTGGTAGACCTTGGGGTCCTTACTCAAGAGTCATATTTTGGGAAACATATTTTTCGTCAGTGGTAACTCCTCAAGGATGGGATCAATGGAATTTAACGACGAGTGGCGTGCAAAATACTGTCTTTGCAGAAGTAAATTGTACAGGACCAGGGGCCAATACTGAGAAACGTGTTGGGTGGGAGAAGAAACCAAGTAGCTTAAACATGAATGATTATAGTTTGTCAACTTTCGTAAATAAGGATGGATGGCTTGATAATTTACCATCAATATAA 990 0.3707 MTMSLQISMMFLLVLFMSCFSIGRAIDCGGNQVANTIIVDQGGKGAFKTVQAAIDSVKNPNDRWVLIKINPGVYKEKVLIHPRKPCIILKGSGSDSTIITYNDAANDIGTSNSATFHSSPPNVILSGISFKNTHGTEGPAVAASIYGDKTAVFECSFTGYQDTLLSSKRRQYFKNCYVEGEADFIFGEGQSYFENCKINATQAPSKPIGFVTAQRRDSPKSPNGYVFKGGRIDGNGQVNLGRPWGPYSRVIFWETYFSSVVTPQGWDQWNLTTSGVQNTVFAEVNCTGPGANTEKRVGWEKKPSSLNMNDYSLSTFVNKDGWLDNLPSI 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02685 329 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 30 324 - -
Vivi7g02685 329 SUPERFAMILY Pectin lyase-like 33 325 IPR011050 -
Vivi7g02685 329 Gene3D - 30 327 IPR012334 -
Vivi7g02685 329 Pfam Pectinesterase 37 318 IPR000070 GO:0030599|GO:0042545
Vivi7g02685 329 FunFam Pectinesterase 31 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02685 Vivi-Chr7 90794218 90795902 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02685 11 270 Carbohydrate Esterase AT2G19150 42.963 1.72e-64 204
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02685 - - tpra:123922273 389.423