Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02677 ATGAAGAGACGATTCGCTGATTTAGATGATGAATCCGAGACTGAGTATCAGTCTCTGCTTGTATCGAATTATCATCTTGAAGATGACGATGATGAGCCTGTATCTTTTTCTGTTTTGCCGCTTAAATGGAGAGATTCCGAGGTTTCGAATGTTGATGATGGCAGCAGAGGGAAGATATTCCTGCATGGAACTTCAGATAGTGGATTGCAGAAGATTTTCATGCAGGTTACTGCTTGGAAGTTTGATCTTTCTGGTTTAAAGCCTGAGGTGTTGTTGCTGTCGAAGGATAGGAGGTGGATTAAGCTTCAGAAGCCGCGGAAAAGCTTTCAGGATACTGTTAAAACTGTTATAATTACGCTTTACTTTCTTCATTGTGTTAAGAGGAAACCTCGATTATCTACTGATTCTTTTTGGAGTAACTTGTGTAAGGATAGAGATTTGAGCTCTTATGGGTTTAAACCTTCACACAAGGATTTACTGGATCATATGCCTTTGATTGGTGAAGCTACCAGAAGAGATGTTTTCCTTGCTCGGTCTAAGCTTTTGCGCACAGTTTTAGGGGACAAGCCAGAGTATGAAAAACTATCTTATGAGGAATCTGAAGATAGTGACAATGACATCATCGAAGAAACTGATGAAGACTCAAAAGTAGAGGATGATTTGTTTGATTCCGTTTGTGCAATGTGTGACAATGGTGGTGATCTTATAATGTGTGATGGAGCATGCATGAGGTCTTTTCATGCTACTAAGGCGGATGGTAGGGAATCTATGTGTGATTCTCTTGGATTTACAAAGAAGCAAGTTGATGATATTGAGACATTTTATTGTAAAAATTGTGAATATCGTCAGCATCAATGCTTTGCATGTGGCAAGCTGGGTTCGTCTGATAAAGATAAGGGTGCCGAGGTCTTTAAATGTGCTTCTGAAACATGTGACCGTTTCTACCATCCACATTGTGTCGCAAAGTTACTTCCTCCTGAGAAACATTTTGCCGAGGGGAAACCCTTTACATGTCCAATTCATTTTTGTTGTGTCTGTAAAGGATTGGAGAATAAGATGGAACATGAGTTGCAATTTGGAGTTTGTAACCGATGTCCAAAGTCATATCATCGCAAATGTTTGCCGATAGGGATTGCTTTTGACATCGATGGTGTTGAAACAAGGGCTTGGGAAGGTCTTTTGCCACACAATCGCATTCTTATATATTGCTTAAATCACGAGATCATTGATAAGCTTGGGACTCCTGTAAGAGATCATGTAAAATTCCCCGACATTGGAGCTAGTGTTCTGGAAAATAATATTTCTAATAAGAGAATGAAGCCTACAACTAAAGAGAGAGTTATATTTGAGAACAATGTTGACATTGTTAAATCATCTGGGAAGAGCACTGCAAATCACGAGATCAATGATAAGCTTGACACTCATGTAAAGGATCATATAAAATTCCCCAACACTAAAGCTAGCGTTCGGGAAATTAATACTTCTAATAAGAGGATGAAGCCTACAACTAAAGAGAGATTGGAGAACAATGTTGGTTTTGTTAAATCATATGGGAAGAGCACTGCAAATCATGAGATCAATGAGAAGCTTGGGACTCCTGTAAAAGATCATATAAAACTCCCTGATGCTAAAGCTAGTGTTCGGGAAATTAACACTTCTAGTACGAGGTTGAAGCCTACAACTAAAGAGAGAGTTATATTGGAAAACAATACTGGCTTTGTTAAATCATCTGGGAGGAGCACTGCAGCAGGATCTAAAGTAACTAAGAAGACAGTTACATTGGAGAACCATGTTGGTTTTGATGAATCATCTCGGATGAGCACTGCAGCAGGATCTAAAGTAAATAAAGAGACCGTGTTGGCTTTGATAAATGTTGGCTTTGATAAATCATCTGGGAAGAGCACCACAGCAGGGTCTAAAGCATCTAAAGAAAGAGTTGCATTGGAGAACAATGTAGGCTTTGATAAATCATCTGGGAAGAGCACTGCTGCAGGATCTAAAGTAACTAAAATGACAGCTACATTGGATAACAATGTTGGCTTTGATAAATCATCTGAGAAGAGCACCGCAGCAGGGTGTAAAGCATCTAAAGAAAGAGTTGCATTGGAGAACAAAGTCGGCTTTGATAAATCATCTGGGAAGAGCACTGCTGCAGGATCTAAAGTAACTAAAATGACAGCTACATTGGAGAACAATATTGGCTTTGATAAATTGTCTGAGAAGAGCACCACAGCAGGGTGTAAAGCATCTAAAGAAAGAGTTGCATTGGAGAACAATGTCGGCTTTGATAAATCATCTGGGAAGAGCACTGTTGCAGGATTTAAAGTGACTGGAAAACTGCCTTCAAATAATCACACATCAAATGAAACATCCAGAAGGGTTTTGACTGAAAATAAGAAATCAGTCTCAAACCTAACTGGTCAGAAATTGAATGCTTCTATGAGTAAAGGTTTTAAACCAACCCAGCATGACAATCAGGTCGATGATGCAGACAATGAAACCCTGTCGATCAAACCTATAAGAACTACATTGCCTCCAGCTCCTGTGAGTAAAGGTTTAAAACAAAGCAAGCAGCTTGATGATGCAGATAATCAGACCCTGTCAATCAAGCCTATTAGAAGTGTATTGTCTCCACTGGATGCGGATTCAGAGAAAGGTTTGGTGGATTCATTTAAAGAAGCCAGATCCTCAATATTATTGGAGGGTATGGTAGGAAAGCAAAAGTTGGGAGATGTTGAGGACAAGCTGGTGCTGAATCATGATCTCCCAGAGTCAACTGATGTTCAAGAAGAAGAAGCATGCGTAAATGAAAGTCAGAAAAGAAGTTCACGGCATGGTAGTCTTGAAGAGGAGAGTGATAAGAAACATGAGTTTAAGATTAGCCAGTCTTGGAAGACATCTGGGAAGAGAACACAAGTTAAGAAAAATGATAGAAGAGGACTGGGTGTGGCCTCACAATTGTTTAAAGGAAAAGGGGCGGTCTCAAAAGCCAAAACCATAACACGGCTTGTAAAAGAAGTGTCTAGCCATCAGAGGAAAACTCGTAGTGAGACTAAAAGTTTCCAGACTCCTGATCGTGTTGTGCCGGCAGGTTTTGCAGCTGGTCCTAATTATGAATATTCACTCCACCATTCAGCAGGTTGGCTTGATGAGTAG 3156 0.3992 MKRRFADLDDESETEYQSLLVSNYHLEDDDDEPVSFSVLPLKWRDSEVSNVDDGSRGKIFLHGTSDSGLQKIFMQVTAWKFDLSGLKPEVLLLSKDRRWIKLQKPRKSFQDTVKTVIITLYFLHCVKRKPRLSTDSFWSNLCKDRDLSSYGFKPSHKDLLDHMPLIGEATRRDVFLARSKLLRTVLGDKPEYEKLSYEESEDSDNDIIEETDEDSKVEDDLFDSVCAMCDNGGDLIMCDGACMRSFHATKADGRESMCDSLGFTKKQVDDIETFYCKNCEYRQHQCFACGKLGSSDKDKGAEVFKCASETCDRFYHPHCVAKLLPPEKHFAEGKPFTCPIHFCCVCKGLENKMEHELQFGVCNRCPKSYHRKCLPIGIAFDIDGVETRAWEGLLPHNRILIYCLNHEIIDKLGTPVRDHVKFPDIGASVLENNISNKRMKPTTKERVIFENNVDIVKSSGKSTANHEINDKLDTHVKDHIKFPNTKASVREINTSNKRMKPTTKERLENNVGFVKSYGKSTANHEINEKLGTPVKDHIKLPDAKASVREINTSSTRLKPTTKERVILENNTGFVKSSGRSTAAGSKVTKKTVTLENHVGFDESSRMSTAAGSKVNKETVLALINVGFDKSSGKSTTAGSKASKERVALENNVGFDKSSGKSTAAGSKVTKMTATLDNNVGFDKSSEKSTAAGCKASKERVALENKVGFDKSSGKSTAAGSKVTKMTATLENNIGFDKLSEKSTTAGCKASKERVALENNVGFDKSSGKSTVAGFKVTGKLPSNNHTSNETSRRVLTENKKSVSNLTGQKLNASMSKGFKPTQHDNQVDDADNETLSIKPIRTTLPPAPVSKGLKQSKQLDDADNQTLSIKPIRSVLSPLDADSEKGLVDSFKEARSSILLEGMVGKQKLGDVEDKLVLNHDLPESTDVQEEEACVNESQKRSSRHGSLEEESDKKHEFKISQSWKTSGKRTQVKKNDRRGLGVASQLFKGKGAVSKAKTITRLVKEVSSHQRKTRSETKSFQTPDRVVPAGFAAGPNYEYSLHHSAGWLDE 1051
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02677 1051 PANTHER PHD FINGER-CONTAINING PROTEIN DDB_G0268158 15 440 - -
Vivi7g02677 1051 MobiDBLite consensus disorder prediction 922 963 - -
Vivi7g02677 1051 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 283 363 IPR013083 -
Vivi7g02677 1051 Pfam Cytosine specific DNA methyltransferase replication foci domain 20 130 IPR022702 -
Vivi7g02677 1051 SUPERFAMILY FYVE/PHD zinc finger 209 283 IPR011011 -
Vivi7g02677 1051 MobiDBLite consensus disorder prediction 1007 1028 - -
Vivi7g02677 1051 CDD PHD2_NSD 285 341 - -
Vivi7g02677 1051 CDD PHD_SF 342 376 - -
Vivi7g02677 1051 MobiDBLite consensus disorder prediction 922 978 - -
Vivi7g02677 1051 SMART PHD_3 343 407 IPR001965 -
Vivi7g02677 1051 SMART PHD_3 285 342 IPR001965 -
Vivi7g02677 1051 SMART PHD_3 225 280 IPR001965 -
Vivi7g02677 1051 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 222 282 IPR013083 -
Vivi7g02677 1051 MobiDBLite consensus disorder prediction 775 803 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02677 Vivi-Chr7 90651047 90658170 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02677 218 331 PHD Transcription Factor Family AT3G14980 30.252 4.53e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02677 - - vvo:131615766 2071.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02677 7 90651047 90658170 Vivi7g02677 7 90651047 90658170 ECH
Vivi3g05453 3 113071994 113086398 Vivi7g02677 7 90651047 90658170 PCT