Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02670 ATGATCCTTACGTTCTCATCAATACATATTCAACAATATTTTCATAAAATGGCAGAAAACATGAAAGAACCTCGTCTTGTTACTAGGAAGTTCTTAGCCAAACCTCAACGAGAAGGTGTTGGTGCTGTTGTTAGAAGAAGCATAGGAAGATTTGAGCTCAAGTACTTTGATCCTTTTCTTGTCTTGGATGAATTCTCAGTTGCTGCTCCTGCTGGATTTCCTGATCATCCACATAGAGGTTTTGAGACTGTCACATATATGTTACAGGGGGCTATAACACATGAAGATTTTGAAGGACACAAAGGAACAATTGAAGCTGGTGACTTGCAGTGGATGACTGCTGGCAGAGGGATTGTGCACTCTGAAATGCCTGCTGCTCAAGGAATTCAAAAGGGTTTGCAACTATGGATCAACCTTGCCTCCCAACATAAAATGATTGAACCAAAGTATCAAGAAGTTTTAAACAAGGACATAGTAGAAGCTACAAAAGATGGTATCAAGGTTAGGGTTATAGCAGGGGAAGCACTTGGTATAAAGTCTCCAATATACACAAGAACACCAACAATGTATTTGGATTTTACTCTTAAACCTGGATCACACTTACAACAACTTGTACCAAAATCATGGAATGCTTTTGTGTATATTTTGGAAGGAGAGGGTATTTTCGGAAACCAAAATTCTCTTCCTACAACCTCTCACCATATTCTTCTTCTAGGTTATGGGGATGGTGTGGAGGCATGGAATAAATCTTCTAAGATACTAAGGTTCATTTTGGTTGGAGGGGAACCATTAGGTGAACCAATGGTGCAACTTGGACCCTTTGTGATGAATACTCAACAAGAGATTGATCAAACTATTGATGACTTTGAAAACTATACCAATGGATTTGAGAAAGCAAGAGATTGGAGATCTTAG 915 0.3891 MILTFSSIHIQQYFHKMAENMKEPRLVTRKFLAKPQREGVGAVVRRSIGRFELKYFDPFLVLDEFSVAAPAGFPDHPHRGFETVTYMLQGAITHEDFEGHKGTIEAGDLQWMTAGRGIVHSEMPAAQGIQKGLQLWINLASQHKMIEPKYQEVLNKDIVEATKDGIKVRVIAGEALGIKSPIYTRTPTMYLDFTLKPGSHLQQLVPKSWNAFVYILEGEGIFGNQNSLPTTSHHILLLGYGDGVEAWNKSSKILRFILVGGEPLGEPMVQLGPFVMNTQQEIDQTIDDFENYTNGFEKARDWRS 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02670 304 CDD cupin_pirin_N 42 139 - -
Vivi7g02670 304 Gene3D Jelly Rolls 38 290 IPR014710 -
Vivi7g02670 304 FunFam pirin 38 174 - -
Vivi7g02670 304 PANTHER PIRIN-RELATED 19 304 IPR012093 -
Vivi7g02670 304 SUPERFAMILY RmlC-like cupins 25 303 IPR011051 -
Vivi7g02670 304 CDD cupin_pirin_C 187 263 - -
Vivi7g02670 304 Pfam Pirin C-terminal cupin domain 190 294 IPR008778 -
Vivi7g02670 304 Gene3D Jelly Rolls 159 264 IPR014710 -
Vivi7g02670 304 Pfam Pirin 44 137 IPR003829 -
Vivi7g02670 304 PIRSF Pirin 23 303 IPR012093 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02670 Vivi-Chr7 90576202 90578542 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02670 19 300 Calmodulin-binding Proteins AT3G59220 60.915 1.19e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02670 K06911 - gmx:100790637 533.872
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02670 7 90576202 90578542 Vivi7g02670 7 90576202 90578542 ECH