Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02657 ATGAGTCTACGATATTATTGTCAATATAGACCCATGATTCATTCAACATACATCCACACAAAAAATGAAGGAGGTGAGTTACTATCATCATCATTAGAGTCTCATTCTTTCTTCACTTTCCTTAAAGCTCTTGATTCCGATAATGTTTTCAACATTACCAAGATATCCAATCCATGTTTTAACAACAAGTTCAAGGGTGTAACATGCAACTCAAATGCTACAAATATTATAGAGATAAACCTTGACAACATGAACCTTAGTGGCATATTTGACGTGGATTCACTATGCAAACTCCAAAACCTTAGAGTTGTTAGTTTAGCTAATAATAATCTCAAAGGGAATATCTCAAACTCAATTTTGCTTTGTAGAAGGTTGGTTTATTTAAATGTAACCAATAATAAACTAAGTGGTAGGTTACCAAAGGCTTTGAAAAGATTGAAATATCTTAAGAATTTGGATTTGACTAACAATAATTTTTCTAGTAATTATATGGTGCAATTTAGTAAGCTAGAGAGTGAGAGTGATGTGGTAGAAAGAATAGAGCCAACACCAAGTTCTTTAAATTCTAATGATAAATCTGAACATGGAAAGAAAGCATGGTATTCCCATATTGAGATTTTGGTAGGGTTAGTTTTGGGAATTGGATTGCTTTTATCATCACTATACTTTATGGTAAAGAAATCATCTAAATTAATGGGAGAGAGTGAGGTGAAGAAGAAGCATATAGATTCTCCTATGAAAAAGGTGACAAATGAGGTGAGGTTAAAAGGGGGTGTTAATAGTAATTCAGAACTTGTGTTCTTTGTTGAAGATCATGAAAGGTTTAGTTTGGAGGATTTGTTAAGAGCTAAAGCTGATTTGAGAAGTGAGAATTTTTGGAGTAGTCTTTTTAAGGTGAAACTTGAGAATAATGTTGAATATGGGGTGAAAAGAATGAAGAATTTGCAAGTTTCTTGTGATGAGTTTTGTGAAATCTTGAAGAAGATAAGTGAAGTGAAGCATCAAAATATTCTCCCTCTTGTTGGTTACCGTTGTACAAGTGAAGAAAAACTTATCATTTACAAATATCAAAGCAATGGAAGTTTGCTCAACCTTTTAAATGATTATATAGCGAAGAGAAAAGTTTTTCCATGGAAACTTCGTCTCGAAATAGCACGTGGAATTGGGAGGGGTTTGGCCTTCATATACAAGAAATTGGAAGAAGGACAGATCAATATTCCTCATGGAAACATCAAGCTATCAAATATTCTTCTTAATGAAAAAAACGAAGCACTAATAAGTGAACACGGTTTATCAAAATTCTTCGAACCAAACCGAGGAGCTACTCTCTTTTCCTCTCATGGACACATAGCCCCCGAAAGAAGTTTAACCGAAAAAGGCGACGTCTATAGCTTCGGGGTGATCCTACTAGAATTACTAACCGGACAAAGCACAGAAGCTAGTAGAATCGATCTTGTTCGATGGGTAAGATCAATGGTGAGAGAGGAATGGACAGGAGAAGTTTTTGATAAAGAAGTTAGAGAGAATGATCAACAAGGTGCATTTTCATTGTTGAATATTGCTCTTAAGTGTGTGTCCGGTTTACAAGAAAATAGGCCAAATGTTGGAGAGGTTTTGGACATAATAGAGGGGGTTATGAATGCACATGAAAAACAAGAGTTGGAATTTTCTACTTCAAAATGTTGTTCTAGTGGATCTAATCAAGAATGTTGTTCACTTCATCAAATCATACCTGATACATGGGATTCTCCCGGATCAAATTATTGA 1767 0.3463 MSLRYYCQYRPMIHSTYIHTKNEGGELLSSSLESHSFFTFLKALDSDNVFNITKISNPCFNNKFKGVTCNSNATNIIEINLDNMNLSGIFDVDSLCKLQNLRVVSLANNNLKGNISNSILLCRRLVYLNVTNNKLSGRLPKALKRLKYLKNLDLTNNNFSSNYMVQFSKLESESDVVERIEPTPSSLNSNDKSEHGKKAWYSHIEILVGLVLGIGLLLSSLYFMVKKSSKLMGESEVKKKHIDSPMKKVTNEVRLKGGVNSNSELVFFVEDHERFSLEDLLRAKADLRSENFWSSLFKVKLENNVEYGVKRMKNLQVSCDEFCEILKKISEVKHQNILPLVGYRCTSEEKLIIYKYQSNGSLLNLLNDYIAKRKVFPWKLRLEIARGIGRGLAFIYKKLEEGQINIPHGNIKLSNILLNEKNEALISEHGLSKFFEPNRGATLFSSHGHIAPERSLTEKGDVYSFGVILLELLTGQSTEASRIDLVRWVRSMVREEWTGEVFDKEVRENDQQGAFSLLNIALKCVSGLQENRPNVGEVLDIIEGVMNAHEKQELEFSTSKCCSSGSNQECCSLHQIIPDTWDSPGSNY 588
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02657 588 SUPERFAMILY Protein kinase-like (PK-like) 294 550 IPR011009 -
Vivi7g02657 588 Gene3D Ribonuclease Inhibitor 33 187 IPR032675 -
Vivi7g02657 588 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 51 163 IPR046959 -
Vivi7g02657 588 SUPERFAMILY L domain-like 55 170 - -
Vivi7g02657 588 Gene3D Transferase(Phosphotransferase) domain 1 358 567 - -
Vivi7g02657 588 ProSiteProfiles Protein kinase domain profile. 282 546 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02657 588 Pfam Protein tyrosine and serine/threonine kinase 302 539 IPR001245 GO:0004672|GO:0006468
Vivi7g02657 588 Gene3D Phosphorylase Kinase; domain 1 247 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02657 Vivi-Chr7 90426813 90433342 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02657 33 568 Receptor kinase-like Gene Family AT4G23740 28.780 1.35e-67 229
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Vivi7g02657 PK_Tyr_Ser-Thr 3.1e-20 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02657 - - gmx:100807491 674.855