Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02650 ATGCAAACATCTCTTAAACACGAAATGTCGTATGAATCCGACATGTTCAGCGTTGAGCCGATTCAAAATCTAGACTCATATTGCTTTCTACCAAATGAGAATCTCGAAAACTACTCGTCCTCTGATAACGGTAGCCATTTAACCTACCCTTCATTTCAAGCTTTAGACCAATATTCCGCCCTTGGATCTTCTAACAACAGTCCAGTCTCAAAACTACAGTCAAAATCTTCCACGTTCACGTCGCAAGATTCTCTTGAAATTATCAACAATTCGTTAGAGAACGAATCGTCTTTGACACACAACCAAGATGACTTGTGGCACAAGATAAGAGAGCTTGAAAATGCTATGCTCGGACACGATGCAGCCGACATATATAACGATACTGATATGATTCAAGAAGAATCGGATCCACTTATGTTAGAGGCGGAAAAGTGGAACAAAATGATGAAGATGATATCGAGAGGCGATTTGAAAGAAGCGCTTTTTACTTGTGCAAAAGCGGTATCAGAAAATGATATAGAAACAACTGAATGGCTAATGGCAGAGTTGTCGAAAATGGTCTCGGTTTCGGGAAGTCCGATCCAAAGGATAGGAGCATACATGTTGGAAGCTCTTGTTGCAAGAATCGCTTCTTCGGGAAGCATAATTTACAAATCCTTGAAATGTAAAGAACCTACCATTGCTACTAGTAATGAACTCCTTTCACACATGCATGTGCTTTATGAAATCTGTCCCTACCTCAAATTCGGATACATGTCCGCAAACGGAGTCATTGCCGAAGCATTGAAGGATGAAAGTGAAGTTCATATAATTGATTTTCAGATTAATCAGGGAGTTCAGTGGATAAGTCTAATCCAAGCTCTTGCTGGAAAACCAGGAGGACCGCCGAAGATCAGAATAACCGGTTTCGATGATTCGACTTCAGCTTATGCGAGAGGAGGAGGACTTGATATTGTTGGACAAAGGTTGTCGAAACTCGCACAATCATATAATGTAGCATTTGAGTTCCATGCTGTAAAGGCTAATCCTACCGAGGTAAAACTCGAAGACCTTGAACTTCGTCGCGGTGAAGCTATTGCGGTGAATTTCGCCATGACGCTACACCATGTGCCGGACGAAAACGTACACGGAGGTCAGAATCATCGCGGCCGGTTGGTGAGATTGGTGAAGAGCTTGTCTCCAAAGGTAGTGACTCTTGTTGAACAAGAATCAAACACCAACGAGCTTCCGTTCTTCGCACGTTTCGTCGAGACAATGAACTACTACTTGGCAGTTTTCGAATCAATCGACGTCGCTTTGCCGAGGGAACACAGAGAACGGATTAACGTGGAACAGCATTGTTTGGCTCGCGAAGTTGTGAATTTAATCGCGTGCGAAGGCGCGGAAAGGGTAGAACGTCACGATCCTCTGGAGAAGTGGAAATCGTGTTTCACAATGGCTGGATTCACACCATATCCATTGAGTCCTTATATTAATGGTTCAATAAAGAATCTTCTAGAAAGTTATCAAGGACAGTACACTCTTGAAGAGAATGATGGTGCTCTTTATCTTGGTTGGATGAATCGGGCTCTTATTACTTCTAGTGCTTGGAGGTGA 1596 0.4273 MQTSLKHEMSYESDMFSVEPIQNLDSYCFLPNENLENYSSSDNGSHLTYPSFQALDQYSALGSSNNSPVSKLQSKSSTFTSQDSLEIINNSLENESSLTHNQDDLWHKIRELENAMLGHDAADIYNDTDMIQEESDPLMLEAEKWNKMMKMISRGDLKEALFTCAKAVSENDIETTEWLMAELSKMVSVSGSPIQRIGAYMLEALVARIASSGSIIYKSLKCKEPTIATSNELLSHMHVLYEICPYLKFGYMSANGVIAEALKDESEVHIIDFQINQGVQWISLIQALAGKPGGPPKIRITGFDDSTSAYARGGGLDIVGQRLSKLAQSYNVAFEFHAVKANPTEVKLEDLELRRGEAIAVNFAMTLHHVPDENVHGGQNHRGRLVRLVKSLSPKVVTLVEQESNTNELPFFARFVETMNYYLAVFESIDVALPREHRERINVEQHCLAREVVNLIACEGAERVERHDPLEKWKSCFTMAGFTPYPLSPYINGSIKNLLESYQGQYTLEENDGALYLGWMNRALITSSAWR 531
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02650 531 Pfam GRAS domain family 157 531 IPR005202 -
Vivi7g02650 531 ProSiteProfiles GRAS family profile. 148 531 IPR005202 -
Vivi7g02650 531 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 108 525 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02650 Vivi-Chr7 90367947 90370895 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02650 1 531 GRAS Transcription Factor Family AT1G50600 56.007 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi7g02650 GRAS 1.1e-130 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02650 - - cam:101502619 872.848
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02650 7 90367947 90370895 Vivi7g02650 7 90367947 90370895 ECH
Vivi2g06743 2 205717245 205719742 Vivi7g02650 7 90367947 90370895 PCT
Vivi3g05384 3 110405151 110408079 Vivi7g02650 7 90367947 90370895 PCT