Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02621 ATGTCTAGATTTTTAACTCTCCACCCTTACAATCCTTTCATCTTTCTTCCAAATTCATCCTCTAACTATCCTTGTCACTCTTCCTTTTCCAACCGAACCACCTTCACTGTCTTTTCTACTCATTCCAATCCTAACCTTCTCAAAACCAACCGAAGATCAACCTATAGTAAACCCCTCTTCCCGTATAACCTTGATGATGATGACGACGATGACGATGACGATGATGATGATGATGATGATGACGACGATGATGATTTGTTCTCTGATGACGAATTTGCTGAGTCTGCTGAATTTCATGCTAAAGACAAGAGATCGAAATCAAACACAATTGCAGATAGACAAAGTAGTAATTTGCCCATAAGTCGGAGAATAGCATCCTTGCAACAAAATAAGAGTGGAAAGTTTGGTAGAAATTCTAGGTCGGAAAGATATCCAGAGGTGTCTGAAGAGATTGATTTGGATGTGAAATGGTTGCCACTTCTCGATTACTTAAGCACCTTTGGAATTAAGGAATCGCAATTGGTCCAAATTTATATGAAGCACAGGTCGTCATTTAAAATTAATGTATGTTCTGCACAGGAAAGGTTAGATTACTTAATGAGTCTTGGAGTTAAACATAAAGATATAAAGAGAATCCTTTTGCGGCATCCGCAGATTCTCGGGTACTTGGTGGAGAACAATTTGAAGGCACATGTAGATTTCTTAATGAGCTTGGGCGTACCTAGTTCCAAAATAGGGCAACTTATTGCTGTTACTCCGTCCCTTTTTTCTTACAGTCTTGAGAAATCGTTAAAACCAACGGTGAAATATTTAATTGAGGAAGTTGGCATCAATGAAAAAAATTTGGGTAAAGTCATTCAACTGAGTCCTCAAATTCTAGTCCAGAGTATTGACATTTCGTGGAATACTCGATTAATGTTCTTTACCAAAGAGTTGGGTGCGTCAAAAGAGAGCGTTGTGAAGATGGTAACAAAACACCCGCAGCTTCTCCATTACAGCATTGATGACGGATTGCTTCCAAGAATAAATTTCCTCAGGAGCGTAGGAATGAAAAATGACGACATCTTGAAAATCTTAACTAGCCTTACACAGGTGCTATCGCTCTCCTTGGAGGCTAACCTAAAGCCGAAGTATTTGTACTTGGTGAATGAACTTCACAATGAGGCGCAATCCCTGACCAAATACCCTATGTACCTAAGCTTGTCTCTGGATCAGAGAATTCGCCCTCGTCACAGGTTCTTGGTTTTTCTAAAGAAAGCTCCCGAAGGACCATTTCCTCTAGGGTCTCTACTTCCAACTGACGAAAGCTTTTGTCAAAAATGGGCTGGAACTACTCTTGATAAATATATGGCATTTCGCCAGAGATCTTCCCTCAAAAATTTAGCTGAGAAATATGACCGAAAAATGTGA 1410 0.3965 MSRFLTLHPYNPFIFLPNSSSNYPCHSSFSNRTTFTVFSTHSNPNLLKTNRRSTYSKPLFPYNLDDDDDDDDDDDDDDDDDDDDDLFSDDEFAESAEFHAKDKRSKSNTIADRQSSNLPISRRIASLQQNKSGKFGRNSRSERYPEVSEEIDLDVKWLPLLDYLSTFGIKESQLVQIYMKHRSSFKINVCSAQERLDYLMSLGVKHKDIKRILLRHPQILGYLVENNLKAHVDFLMSLGVPSSKIGQLIAVTPSLFSYSLEKSLKPTVKYLIEEVGINEKNLGKVIQLSPQILVQSIDISWNTRLMFFTKELGASKESVVKMVTKHPQLLHYSIDDGLLPRINFLRSVGMKNDDILKILTSLTQVLSLSLEANLKPKYLYLVNELHNEAQSLTKYPMYLSLSLDQRIRPRHRFLVFLKKAPEGPFPLGSLLPTDESFCQKWAGTTLDKYMAFRQRSSLKNLAEKYDRKM 469
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02621 469 MobiDBLite consensus disorder prediction 64 86 - -
Vivi7g02621 469 PANTHER CGI-12 PROTEIN-RELATED 244 366 IPR003690 GO:0003690|GO:0006355
Vivi7g02621 469 MobiDBLite consensus disorder prediction 57 86 - -
Vivi7g02621 469 Gene3D Transcription termination factor 3, mitochondrial 138 226 IPR038538 -
Vivi7g02621 469 Gene3D Transcription termination factor 3, mitochondrial 227 455 IPR038538 -
Vivi7g02621 469 MobiDBLite consensus disorder prediction 98 123 - -
Vivi7g02621 469 FunFam Transcription termination factor MTERF9, chloroplastic 221 456 - -
Vivi7g02621 469 Pfam mTERF 143 415 IPR003690 GO:0003690|GO:0006355
Vivi7g02621 469 SMART mt_12 320 351 IPR003690 GO:0003690|GO:0006355
Vivi7g02621 469 SMART mt_12 283 315 IPR003690 GO:0003690|GO:0006355
Vivi7g02621 469 SMART mt_12 210 241 IPR003690 GO:0003690|GO:0006355
Vivi7g02621 469 SMART mt_12 389 421 IPR003690 GO:0003690|GO:0006355
Vivi7g02621 469 SMART mt_12 246 278 IPR003690 GO:0003690|GO:0006355
Vivi7g02621 469 SMART mt_12 175 205 IPR003690 GO:0003690|GO:0006355
Vivi7g02621 469 SMART mt_12 356 388 IPR003690 GO:0003690|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02621 Vivi-Chr7 89979127 89982281 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g02621 mTERF 1.6e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02621 K15031 - gmx:100809638 583.948
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02621 7 89979127 89982281 Vivi7g02621 7 89979127 89982281 ECH