Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02620 ATGTCTAGATTTTTAACTCTCCACCCTTACAATCCTTTCATCTTTCTTCCAAATTCATCCTCTAACTATCCTTGTCACTCTTCCTTTTCCAACCGAACCACCTTCACTGTCTTTTCTACTCATTCCAATCCTAACCTTCTCAAAACCAACCGAAGATCAACCTATAGTAAACCCCTCTTCCCGTATAACCTTGATGATGATGACGACGATGACGATGACGATGATGATGATGATGATGATGACGACGATGATGATTTGTTCTCTGATGAATTTGCTGAGTCTGCTGAATTTCATGCTAAAGACAAGAGATCGAAATCAAACACAATTGCAGATAGACAAAGTAGTAATTTGCCCATAAGTCGGAGAATAGCATCCTTGCAACAAAATAAGAGTGGAAAGTTTGGTAGAAATTCTAGGTCGGAAAGATATCCAGAGGTGTCTGAAGAGATTGATTTGGATGTGAAATGGTTGCCACTTCTCGATTACTTAAGCACCTTTGGAATTAAGGAATCGCAATTGGTCCAAATTTATATGAAGCACAGGTCGTCATTTAAAATTAATGTATGTTCTGCACAGGAAAGGTTAGATTACTTAATGAGTCTTGGAGTTAAACATAAAGATATAAAGAGAATCCTTTTGCGGCATCCGCAGATTCTCGGGTACTTGGTGGAGAACAATTTGAAGGCACATGTAGATTTCTTAATGAGCTTGGGCGTACCTAGTTCCAAAATAGGGCAACTTATTGCTGTTACTCCGTCCCTTTTTTCTTACAGTCTTGAGAAATCGTTAAAACCAACGGTGAAATATTTAATTGAGGAAGTTGGCATCAATGAAAAAAATTTGGGTAAAGTCATTCAACTGAGTCCTCAAATTCTAGTCCAGAGTATTGACATTTCGTGGAATACTCGATTAATGTTCTTTACCAAAGAGTTGGGTGCGTCAAAAGAGAGCGTTGTGAAGATGGTAACAAAACACCCGCAGCTTCTCCATTACAGCATTGATGACGGATTGCTTCCAAGAATAAATTTCCTCAGGAGCGTAGGAATGAAAAATGACGACATCTTGAAAATCTTAACTAGCCTTACACAGGTGCTATCGCTCTCCTTGGAGGCTAACCTAAAGCCGAAGTATTTGTACTTGGTGAATGAACTTCACAATGAGGCGCAATCCCTGACCAAATACCCTATGTACCTAAGCTTGTCTCTGGATCAGAGAATTCGCCCTCGTCACAGGTTCTTGGTTTTTCTAAAGAAAGCTCCCGAAGGACCATTTCCTCTAGGGTCTCTACTTCCAACTGACGAAAGCTTTTGTCAAAAATGGGCTGGAACTACTCTTGATAAATATATGGCATTTCGCCAGAGATCTTCCCTCAAAAATTTAGCTGAGAAATATGACCGAAAAATGTGA 1407 0.3959 MSRFLTLHPYNPFIFLPNSSSNYPCHSSFSNRTTFTVFSTHSNPNLLKTNRRSTYSKPLFPYNLDDDDDDDDDDDDDDDDDDDDDLFSDEFAESAEFHAKDKRSKSNTIADRQSSNLPISRRIASLQQNKSGKFGRNSRSERYPEVSEEIDLDVKWLPLLDYLSTFGIKESQLVQIYMKHRSSFKINVCSAQERLDYLMSLGVKHKDIKRILLRHPQILGYLVENNLKAHVDFLMSLGVPSSKIGQLIAVTPSLFSYSLEKSLKPTVKYLIEEVGINEKNLGKVIQLSPQILVQSIDISWNTRLMFFTKELGASKESVVKMVTKHPQLLHYSIDDGLLPRINFLRSVGMKNDDILKILTSLTQVLSLSLEANLKPKYLYLVNELHNEAQSLTKYPMYLSLSLDQRIRPRHRFLVFLKKAPEGPFPLGSLLPTDESFCQKWAGTTLDKYMAFRQRSSLKNLAEKYDRKM 468
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02620 468 Gene3D Transcription termination factor 3, mitochondrial 226 454 IPR038538 -
Vivi7g02620 468 Gene3D Transcription termination factor 3, mitochondrial 137 225 IPR038538 -
Vivi7g02620 468 FunFam Transcription termination factor MTERF9, chloroplastic 220 455 - -
Vivi7g02620 468 Pfam mTERF 142 414 IPR003690 GO:0003690|GO:0006355
Vivi7g02620 468 MobiDBLite consensus disorder prediction 97 121 - -
Vivi7g02620 468 MobiDBLite consensus disorder prediction 64 85 - -
Vivi7g02620 468 SMART mt_12 245 277 IPR003690 GO:0003690|GO:0006355
Vivi7g02620 468 SMART mt_12 319 350 IPR003690 GO:0003690|GO:0006355
Vivi7g02620 468 SMART mt_12 174 204 IPR003690 GO:0003690|GO:0006355
Vivi7g02620 468 SMART mt_12 355 387 IPR003690 GO:0003690|GO:0006355
Vivi7g02620 468 SMART mt_12 388 420 IPR003690 GO:0003690|GO:0006355
Vivi7g02620 468 SMART mt_12 209 240 IPR003690 GO:0003690|GO:0006355
Vivi7g02620 468 SMART mt_12 282 314 IPR003690 GO:0003690|GO:0006355
Vivi7g02620 468 PANTHER CGI-12 PROTEIN-RELATED 243 364 IPR003690 GO:0003690|GO:0006355
Vivi7g02620 468 MobiDBLite consensus disorder prediction 57 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02620 Vivi-Chr7 89979123 89982281 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR mTERF Vivi7g02620 mTERF 1.6e-47 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02620 K15031 - gmx:100809638 581.252