Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02613 ATGTTGTTTTCTTTGTCTTCTTCCACTTCACTCATGAACCTTGCTACTGATTTTCTTCTGAAGCCAATTTTCCTTCATGGGTTGTCTAGTGTTCTTCATATACTGTTGCTAGTGGGGGTTTTGGTTTCATGGGTTTGGAAAAGGGTTGCAGCTGGTGTTGGGAATGTTGGGAATGAGACCAAGGAGGAGAAACCAAATAGTACTTTGTTTAAAGTGACAAAGTTTTGTTCTATTGGTTTTTCTTCTTTCAATTTTGTTTTGTTTCTTGTTAATTATTTTTACTGGTATACTAGTGGTTGGTCAGAAGAAAGGCTTGTTACTCTTTTTGATTTAGGTTTGAAAACAGTTGTTTGGTGTGTTGTTTGTGTTTGCTTTCACAAAGGGTTCTTGTTTTTCTTCAGTTCAAGTCAGAGAAAAAGAAGGTTTCCGGTTATCTTCAGAGCTTGGTGTGTCTTTTTTCTATTTGTTTCATGTTATTGCTTTGTGGTTGACATTGTTGTTTTGTATGAAAATCGCGTTGAGTTAACCGTTCGAAGCATTGTTTCGGATGTGGTGTCGGTTTGTGTTGGTTTGTTCTTTTATTATGTCGGGTTTTGGGTGAAAAATGAGATTGGAGAAGGTGATAGAACCCTTCAAGAACCTCTTTTGAATGGTGATACACATGTTAGTAATGGTAATGGTAATGCCTTGGAGTTGAAAGAGACTAAAGGAGGTGACACACTTACCCCTTATTCAAATGCTGGAATTTTGAGCCTTCTCACTTTCACATGGGTGGGTCCATTGATAGCATTTGGCAATAAGAAAGTCTTAGACCTTGAGGATATTCCTCAGCTAGATAGTGGAGATAGTGTGGTTGGAGCTTTTCCAACTTTTAGTGAAAAACTTGAAGCTGATTGTGGTGCAGTCAATAGAGTAACCTCACTTAAGTTAGTTAAGTCAATAATACTCTCAGGGTGGAAAGAGATTCTTTTCACTGCTTTTCTTGCACTGTTAAACACTTTTGCTAGTTATGTCGGTCCTTATCTTATTGATTCTCTTGTTCAATATCTCGGTGGAAAAAGGCTATATGAGAATCAAGGCTATGTCTTGGTTTCTGCATTTTTCCTTGCAAAGGTTGTAGAGTGCTTTACACAAAGGCATTGGTTCTTTAGGTTGCAGCAACTCGGACTTCGTATCCGAGGACTGCTCGTGACTATGATTTATAAAAAAACCTTAACACTTTCATGTCAATCAAGGCAGTGTCACACTTCTGGAGAAATAATCAATTTCATGACTGTTGATGCTGAAAGAGTCGGTATATTCAGTTGGTACATGCATGATATGTGGTTAATAGTTTTGCAAGTTGCGTTGGCGTTGTTGATTTTGTATAAAAACCTTGGACTTGCTTCCATTGCTGCTTTTGTTACGACCATCATTATTATGTTAGCGAATGTTCCGTTAGGATCATTGCAAGAGAAGTTTCAAAAAAATTTGATGGAGTCAAAGGACACAAGAATGAAGACGACGTCTGAAATTTTAAGAAACATGAGGATCCTTAAACTACAAGGATGGGAAATGAAGTTTCTATCTAAAATAACCGAGCTTAGGGATGCAGAACAAGGCTGGTTGAAAAAATTTCTTTATACTTCAGCCATAACTACATTTGTCTTTTGGGGCGCACCTACATTAGTATCTGTGGTTACTTTCAGTACTTGTATGGTTATAGGGGTCCCACTTGAATCCGGGAAGATTCTGTCAGCACTTGCAACGATCAGGATTCTTCAAGAGCCTATTTACAATCTTCCAGATTTAATTTCAATGATAGCACAAACTAAAGTTTCTGTTGATAGGATCGCGTCATTCCTTCGTCTCGAAGACTTGCAGTCTGATGTTGTAGAAAGACTTCCTCAGGGTAGTTCTGATACGGCAATTGAAGTGGCCGATGGGAATTTTTCATGGGATTTATCTTTGCCTAATCCAACTTTACAGAACTTAAATCTCAAGGTTTTTCATGGCATGAAGGTTGCGGTTTGTGGTACTGTTGGATCAGGCAAGTCGACTTTACTCTCTTGTCTACTCGGAGAAGTTCCAAAGGTATCAGGTACCGTTAAGGTTTGTGGAACAAAGGCTTATGTTGCTCAATCACCATGGATTCAAAGTGGCAAGATAGAGGATAATATATTGTTTGGTGAAGAAATGGTCAGGGAAAGGTATGAGAAAGTACTTGAAGCATGTTCCTTAAAAAAGGATTTGGAAATCTTATCATTTGGGGATCAGACGGTTATAGGCGAACGTGGGATAAATTTGAGTGGTGGACAGAAACAAAGAATACAAATTGCTCGCGCTCTTTACCAAGATGCTGATATCTATCTATTTGATGATCCTTTTAGCGCTGTGGATGCTCATACAGGATCTCACCTTTTCAAGGAATGCTTGCTGGGTGTTTTAAGTTCGAAAACCGTTGTTTATGTTACTCATCAAGTGGAGTTCTTACCTACTGCTGACCTTATATTGGTCATGAAAGATGGAAAAATAACTCAAAGTGGAAAGTATGCTGATTTGCTTAACATTGGAACCGATTTTATGGAACTTGTTGGTGCACATAGAGAAGCTTTGTCTACACTTGAATCATTGGGTGAGGGAAAAGCATCTAATGAAATAAGTAAGTTAGAACAAGAAGTAAATATCTCCGGCACTCATGAAGAGGTAAACAAAAATGAGCAAAATGGTAAAGCAGATGATGATACAGGCGAACCGAAAGGCCAACTCGTTCAAGATGAAGAAAGGGTGAAAGGTAAAGTTGGGCTTTCAGTCTATTGGAAGTATATCACAACTGCATATGGAGGAGCTCTCGCACCGTTCATAATATTGGCTCAGATTCTTTTTCAAACTCTTCAAATTGGAAGCAACTATTGGATGGCTTGGGCAACTCCAGTCTCCGCAGATGTAGAGCCACCAGTTACAGGAACAACTCTTATTGAAGTCTATATTGGTTTGGCCATTGGAAGTGCTTTATGCATTCTTGTTAGAGCATTGTTACTCGTTACATTCGGCTATAAGACAGCTACTATACTCTTCAATAAAATGCATTTGGCCATTTTTCGCGCCCCAATGTCGTTTTTTGATTCTACTCCAAGTGGCCGGATCCTTAATAGAGCTTCAACTGATCAAAGTGCAGTGGATACAGACATTCCTTATCAAATTGGCTCATTTGCCTTCTCCTTGATCCAGCTTCTAGGAATTATAATAGTGATGTCTCAGGTTGCATGGCAAGTTTTCATCGTCTTTATTCCCGTGATAACAGTTAGCCTTTACTATCAGCGATTCTATTTACCATCTGCTCGTGAACTATCACGTTTATGCGGAGTATGCAAAGCTCCTATCATTCAACACTTTGCAGAAACAATTTCTGGTACTTCAACCATTAGAAGCTTTGATCAACAGTCAAGATTTCATGCAGCAAACATGAAACTGACGGATGGGTATTCTCGGCCAAAGTTCAATATTGCTGCTGCTATGGAATGGTTATGCATTCGCTTAGATATGTTGTCTTCCATCACATTTGTCTTTTCCTTGATGTTCTTGATATCGATTCCACCGGGAATCATAAATCCAGGCCTTGCTGGTCTAGCAGTTACCTATGGACTGAATTTAAATCAAATACAAGCTTGGGTGATATGGAATATTTGCAACTTGGAGAACAAAATTATATCTGTAGAAAGGATACTTCAATATACAAGCATTCAAAGTGAACCTCCCCTTGTTTTAGAAGAAGAAAATAGACCAGATCCTTCTTGGCCCGCATATGGCGAGGTTGATATACGGAATTTGCAGGTTCGATATGCTCCACATCTTCCGCTCGTGTTGCGTGGCCTGACATGCACGTTTCGTGGAGGATTGAAAACTGGCATTGTTGGAAGAACAGGAAGTGGCAAATCAACACTTATACAAACACTTTTCCGACTCATCGAGCCTACTGCCGGGGAGGTTATCATTGACAGCATCAACATCTCTGCAATCGGACTGCATGATTTGAGGTCTAGACTAAGCATCATTCCGCAGGATCCAACTATGTTTGAGGGGACTGTGAGAAGTAATCTGGACCCTCTCGAAGAGTACAACGATGATCAAATATGGGAGGCCTTGGATAAGTGCCAACTCGGAGATGAAGTTAGAAAGAAAGAAGGAAAGCTTGACTCATCAGTTACTGAGAATGGTGAGAATTGGAGCATGGGTCAGAGGCAATTGGTTTGCCTTGGTAGGGTTCTGCTTAAGAAGAGCAAGATTTTGGTGCTTGATGAAGCCACTGCATCAGTTGATACAGCTACAGATAATTTGATTCAACAAACTCTTAGGAAGCATTTCACGGACTCTACCGTCATTACCATCGCACATCGAATAACTTCTGTTCTTGACAGTGATATGGTTCTACTTCTTGATCAAGGACTTATTGAGGAGTATGACTCACCAACCACATTGCTAGAAGATAAGTCATCATCTTTTGCTAAGCTTGTTGCAGAGTATACCATGAGGTCCAACTCCAATTTTGAGTAA 4533 0.3964 MLFSLSSSTSLMNLATDFLLKPIFLHGLSSVLHILLLVGVLVSWVWKRVAAGVGNVGNETKEEKPNSTLFKVTKFCSIGFSSFNFVLFLVNYFYWYTSGWSEERLVTLFDLGLKTVVWCVVCVCFHKGFLFFFSSSQRKRRFPVIFRAWCVFFLFVSCYCFVVDIVVLYENRVELTVRSIVSDVVSVCVGLFFYYVGFWVKNEIGEGDRTLQEPLLNGDTHVSNGNGNALELKETKGGDTLTPYSNAGILSLLTFTWVGPLIAFGNKKVLDLEDIPQLDSGDSVVGAFPTFSEKLEADCGAVNRVTSLKLVKSIILSGWKEILFTAFLALLNTFASYVGPYLIDSLVQYLGGKRLYENQGYVLVSAFFLAKVVECFTQRHWFFRLQQLGLRIRGLLVTMIYKKTLTLSCQSRQCHTSGEIINFMTVDAERVGIFSWYMHDMWLIVLQVALALLILYKNLGLASIAAFVTTIIIMLANVPLGSLQEKFQKNLMESKDTRMKTTSEILRNMRILKLQGWEMKFLSKITELRDAEQGWLKKFLYTSAITTFVFWGAPTLVSVVTFSTCMVIGVPLESGKILSALATIRILQEPIYNLPDLISMIAQTKVSVDRIASFLRLEDLQSDVVERLPQGSSDTAIEVADGNFSWDLSLPNPTLQNLNLKVFHGMKVAVCGTVGSGKSTLLSCLLGEVPKVSGTVKVCGTKAYVAQSPWIQSGKIEDNILFGEEMVRERYEKVLEACSLKKDLEILSFGDQTVIGERGINLSGGQKQRIQIARALYQDADIYLFDDPFSAVDAHTGSHLFKECLLGVLSSKTVVYVTHQVEFLPTADLILVMKDGKITQSGKYADLLNIGTDFMELVGAHREALSTLESLGEGKASNEISKLEQEVNISGTHEEVNKNEQNGKADDDTGEPKGQLVQDEERVKGKVGLSVYWKYITTAYGGALAPFIILAQILFQTLQIGSNYWMAWATPVSADVEPPVTGTTLIEVYIGLAIGSALCILVRALLLVTFGYKTATILFNKMHLAIFRAPMSFFDSTPSGRILNRASTDQSAVDTDIPYQIGSFAFSLIQLLGIIIVMSQVAWQVFIVFIPVITVSLYYQRFYLPSARELSRLCGVCKAPIIQHFAETISGTSTIRSFDQQSRFHAANMKLTDGYSRPKFNIAAAMEWLCIRLDMLSSITFVFSLMFLISIPPGIINPGLAGLAVTYGLNLNQIQAWVIWNICNLENKIISVERILQYTSIQSEPPLVLEEENRPDPSWPAYGEVDIRNLQVRYAPHLPLVLRGLTCTFRGGLKTGIVGRTGSGKSTLIQTLFRLIEPTAGEVIIDSINISAIGLHDLRSRLSIIPQDPTMFEGTVRSNLDPLEEYNDDQIWEALDKCQLGDEVRKKEGKLDSSVTENGENWSMGQRQLVCLGRVLLKKSKILVLDEATASVDTATDNLIQQTLRKHFTDSTVITIAHRITSVLDSDMVLLLDQGLIEEYDSPTTLLEDKSSSFAKLVAEYTMRSNSNFE 1510
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02613 1510 Gene3D - 1247 1501 IPR027417 -
Vivi7g02613 1510 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1267 1499 IPR003439 GO:0005524
Vivi7g02613 1510 CDD ABC_6TM_ABCC_D2 947 1239 IPR044726 GO:0140359
Vivi7g02613 1510 CDD ABC_6TM_ABCC_D1 324 611 IPR044746 GO:0140359
Vivi7g02613 1510 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 947 1227 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g02613 1510 Gene3D - 616 880 IPR027417 -
Vivi7g02613 1510 SUPERFAMILY ABC transporter transmembrane region 947 1246 IPR036640 GO:0005524|GO:0016020
Vivi7g02613 1510 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 323 603 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g02613 1510 CDD ABCC_MRP_domain2 1263 1483 - -
Vivi7g02613 1510 CDD ABCC_MRP_domain1 637 837 - -
Vivi7g02613 1510 MobiDBLite consensus disorder prediction 892 916 - -
Vivi7g02613 1510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1257 1494 IPR027417 -
Vivi7g02613 1510 Pfam ABC transporter 655 789 IPR003439 GO:0005524
Vivi7g02613 1510 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 633 859 IPR027417 -
Vivi7g02613 1510 FunFam ABC transporter C family member 5 908 1245 - -
Vivi7g02613 1510 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 637 860 IPR003439 GO:0005524
Vivi7g02613 1510 Pfam ABC transporter transmembrane region 323 589 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g02613 1510 Pfam ABC transporter transmembrane region 947 1188 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Vivi7g02613 1510 FunFam ABC transporter C family member 3 1248 1500 - -
Vivi7g02613 1510 Gene3D ABC transporter type 1, transmembrane domain 301 615 IPR036640 GO:0005524|GO:0016020
Vivi7g02613 1510 Gene3D ABC transporter type 1, transmembrane domain 909 1245 IPR036640 GO:0005524|GO:0016020
Vivi7g02613 1510 Pfam ABC transporter 1283 1430 IPR003439 GO:0005524
Vivi7g02613 1510 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 244 1500 - -
Vivi7g02613 1510 FunFam ABC transporter C family member 5 622 869 - -
Vivi7g02613 1510 FunFam ABC transporter C family member 10 306 619 - -
Vivi7g02613 1510 SMART AAA_5 1291 1476 IPR003593 GO:0016887
Vivi7g02613 1510 SMART AAA_5 664 837 IPR003593 GO:0016887
Vivi7g02613 1510 ProSitePatterns ABC transporters family signature. 762 776 IPR017871 GO:0005524|GO:0016887
Vivi7g02613 1510 SUPERFAMILY ABC transporter transmembrane region 315 619 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02613 Vivi-Chr7 89915304 89921650 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02613 637 881 Calmodulin-binding Proteins AT2G36910 30.000 1.19e-21 100