Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02589 ATGATGTTGTTGTTCATGGATTTGTGTTCTAGAGTTGTTGTGATTTTGTTTGGTTTGGTTTTTGTGATGTTGATGGTTGAGGTGGATTTAGCAGAATGTGGTAAAGGCGATGATGATGTTAAGAGTTATATTAGTTGGGAAGATTTGATGGTTGATGAACAAAGATTGGTTTTGAGAAAGAATAATGTTTATAATCATAATGAGATTAGAGTTATTATTGTTGATCAGAATGGAAATGGACATTCGGAAACTGTTCAAGGCGCTGTTGATTTGGTTCCTGATTGGAACAAACATAGAGTCAAAATCTACATTTTTCCAGGAACTTACAGAGAAAGAGTGTTTGTGCCGATTACGAAGCCTTATGTATCGTTTATTGGTAGAAGAAATCTAACTGCTGGGCCTGTAATTACTTGGAACAGCAAATCATCGGATAGAGGCCCAAATGGTCAGACATTGGGAACCTACGGATCAGCGACTGTCGCGGTTGAGTCAGATTTTTTCTGTGCAACTGGTGTCACTTTTGAGAACACAGTGGTTGCATCCGCAGGTGAAAAAGGAATGCAGGCAGTGGCACTGAGAGTAGACAGTGATAGAGCAATGTTCTATAGAGTTAAGATTAAAGGAACGCAAGACACTCTCTTGGACAACACAGGAACTCACTATTTCTATCGGTGTCTCATCGAAGGAAAAGTTGATTTCATCTTTGGCAGTGCAAAATCACTCTATAAGAAGTGTAAGCTTCAATCGGTAGCCGAGAACTATGGAGCAATTGCAGCACATCATAGGGATTCACCATTTCAAGATACCGGATTTTCCTTTGTAGGATGTAGTATTAAAGGAACGGGAAGTGTGTACCTTGGAAGAGCTTGGGGAGATTACGCGAGAGTAATTTACTCTAACTGTCATATGGATGATATTATTATTCCAGAAGGCTGGTCAGCATGGGATCATCCCGAAAGAGAAAAGACTGCGGTGTTTGGTGAATATATGTGCTATGGAAAAGGAGCAGACAGAACACAAAGGGTGCCTTGGTCAAAATCATTAAGCTATAAAGAAGCAAAGCCTTTTTTGGACATTAACTTTATAAATGGAAAAGAATGGCTTAGACTGTAG 1113 0.3953 MMLLFMDLCSRVVVILFGLVFVMLMVEVDLAECGKGDDDVKSYISWEDLMVDEQRLVLRKNNVYNHNEIRVIIVDQNGNGHSETVQGAVDLVPDWNKHRVKIYIFPGTYRERVFVPITKPYVSFIGRRNLTAGPVITWNSKSSDRGPNGQTLGTYGSATVAVESDFFCATGVTFENTVVASAGEKGMQAVALRVDSDRAMFYRVKIKGTQDTLLDNTGTHYFYRCLIEGKVDFIFGSAKSLYKKCKLQSVAENYGAIAAHHRDSPFQDTGFSFVGCSIKGTGSVYLGRAWGDYARVIYSNCHMDDIIIPEGWSAWDHPEREKTAVFGEYMCYGKGADRTQRVPWSKSLSYKEAKPFLDINFINGKEWLRL 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02589 370 Gene3D - 67 370 IPR012334 -
Vivi7g02589 370 Pfam Pectinesterase 72 364 IPR000070 GO:0030599|GO:0042545
Vivi7g02589 370 FunFam Pectinesterase 67 370 - -
Vivi7g02589 370 SUPERFAMILY Pectin lyase-like 71 368 IPR011050 -
Vivi7g02589 370 PANTHER ACYL-COA THIOESTER HYDROLASE YBHC-RELATED 55 369 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02589 Vivi-Chr7 89712331 89714259 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02589 12 322 Carbohydrate Esterase AT5G55590 55.828 2.25e-130 375
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02589 K01051 - gmx:100804220 526.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02589 7 89712331 89714259 Vivi7g02589 7 89712331 89714259 ECH