Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02584 ATGGCCAACGATGATACAAACGAGCCCTTGCTATTGAGATCACAGGACACTGCGGCTCAAAAGGCTAAAGGACGGTTAAACCAAAGAAGGCTTCTCCGTTCTCGAAGTGCTCCTCACACAGATTGTGCTCCTCTGGTGAGAAACAGCAATGAACCAAATCCTCTTTCTGAGTCCATGTTTGGGAATCTACATCCAAGCTTTAGAAATGTTGCTATAATCCTTATGGTCTATTTAGGTATAGGAACTTTAATCTTTTACCTTGTGAGGAACCAAATCAAGGGAATGAAAACAGATAGATTCCTTGATGCCCTATACTTTACAGTTGTGACAATGACCACTGTTGGATATGGAGACCTTGTTCCCAATAGCGACCTAACAAAACTACTCGCATGCGCTTTTGTTTTCTCCGGAATGGCGTTGATGGGACTAATCCTAAGCAAAGCAGCAGATTACTTGGTTGAGAAACAAGAAGTTCTGTTAATTAAAGCCATCCACATGCACCAAAAAGTTGGTCCAAGTGAAATTTTAAAGGAGCTTGAGACCAATAAAACACGATACAAATTCATTCTGGTCCTTTTCCTTCTTTTGATTCTCGTTATTGCAGGGACAATCTTCTTAGTTACTGTCGAAAAATTGTATGTTATTGATGCGTTGTACTGTGTTTGTTCCACAATTACAACGCTTGGTTATGGCGATAAAAGTTTCTCTACTCAAGCTGGAAGAATATTTGCGGTGTTTTGGATATTAGCAGGTACTATTTGCGTAGCTCAGTTTTTCCTCTACATGGCGGAACTAAACACTGAAAGCAGACAAAAGGCACTTGTCAATTGGGTTCTTACAAGGAAAATGACTAATTACGATTTGGAAGCTGCCGATCTTGATGAGGATGGCACTGTTGGGGCTGCTGAATTTGTAATTTATAAGTTGAAAGAGATGGGGAAGATTAATCAAGAAGATGTTACACTTGTGATGAAGGAGTTTGAAGAGCTTGACATTGATCAGTCTGGTACACTGTCTGTTTCAGATATAACACTTGCTCAACCATCTTAG 1050 0.401 MANDDTNEPLLLRSQDTAAQKAKGRLNQRRLLRSRSAPHTDCAPLVRNSNEPNPLSESMFGNLHPSFRNVAIILMVYLGIGTLIFYLVRNQIKGMKTDRFLDALYFTVVTMTTVGYGDLVPNSDLTKLLACAFVFSGMALMGLILSKAADYLVEKQEVLLIKAIHMHQKVGPSEILKELETNKTRYKFILVLFLLLILVIAGTIFLVTVEKLYVIDALYCVCSTITTLGYGDKSFSTQAGRIFAVFWILAGTICVAQFFLYMAELNTESRQKALVNWVLTRKMTNYDLEAADLDEDGTVGAAEFVIYKLKEMGKINQEDVTLVMKEFEELDIDQSGTLSVSDITLAQPS 349
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02584 349 SUPERFAMILY Voltage-gated potassium channels 180 283 - -
Vivi7g02584 349 Gene3D - 169 275 - -
Vivi7g02584 349 PANTHER POTASSIUM CHANNEL, SUBFAMILY K 71 320 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vivi7g02584 349 PRINTS Two pore domain K+ channel signature 223 251 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vivi7g02584 349 PRINTS Two pore domain K+ channel signature 297 306 IPR003280 GO:0005267|GO:0016020|GO:0071805
Vivi7g02584 349 SUPERFAMILY EF-hand 253 344 IPR011992 -
Vivi7g02584 349 FunFam Calcium-activated outward-rectifying potassium channel 1 64 159 - -
Vivi7g02584 349 FunFam Two-pore potassium channel 1 168 276 - -
Vivi7g02584 349 Pfam Ion channel 194 265 IPR013099 -
Vivi7g02584 349 Pfam Ion channel 72 153 IPR013099 -
Vivi7g02584 349 Gene3D - 64 158 - -
Vivi7g02584 349 SUPERFAMILY Voltage-gated potassium channels 67 166 - -
Vivi7g02584 349 ProSitePatterns EF-hand calcium-binding domain. 331 343 IPR018247 -
Vivi7g02584 349 ProSitePatterns EF-hand calcium-binding domain. 292 304 IPR018247 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02584 Vivi-Chr7 89668172 89670884 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02584 52 347 Ion Channels AT5G55630 66.892 1.18e-149 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02584 K05389 - gmx:100800137 514.227
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Vivi7g02584 7 89668172 89670884 Vivi7g02584 7 89668172 89670884 ECH