Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02564 ATGCACCCCTTCAAACCAACCCTCTTCACACTCTTCTCCACCTTCATCCTCGCCGCCGCCGGCAACATCCAACTAAACTTCCCTTATTTCACCACCACCAACATCACCTTCACCGGCGATTCCTCTCTCACCAACCGCCTCATTTCACTAACAAAACCAACCCCACTCAGCACCGGTTCCATCCTTTACAACAACCCAATCCCTCTCTTTGACAAACAAACAAACACCACGTCTTCATTCTCAACTACCTTCTCTTTCTCCATCACAAACCCCAATAACCCCACTTCCTTCGGTGATGGCTTCTGTTTCTTCCTCTCCCCTAACAATCTCTCGTCAACATCCTCCTTTTCCTCATCTTTCTCTCCCTTTGGCCTTCCTACAAACTTCGTTGCTGTCGAATTCGATACTCGATTCGACCCTCGATTCAATGACCCGAACGAAAATCATATCGGTTTCAATATCGATTCATTGAACTCTCTTCGTACTGTTGACCCTATTTTCAATGGAATTGATCTCAAGAGTGGTAACACTATCACTTCTTGGATTGATTACAAGACTGATCAAAACTCTCTTTCTGTTTTCTTGAGCTATTCTGGTATTAAGCCACTTGAACCTATTCTCTTTGTAAATGTTGATCTTTCAGAGTATTTTAGAGATAACCAAGATGTTTACGTTGGTTTCTCGGCTTCTGCTGAAAAAAGTACCGAACTTCATCAGATTGAAAGTTGGAGGTTTTACACTATTGGGTTTGAACCTGTGAGACCGAGGTTGCGTAGTTACAATGTTTCGGATAATTCTGTTATCGGAAATGCGATAAAAGGTAACGTTCACAGATCGCGTTCTTCTAATTCCAAGAAGAGACTTGGTTTTGGTTTTGCTGTTGCAGGTCCTGTTTTTTTCTGTGCTGTTTTTTCTTTGTTGGGGTATTATTCTTTTGTGAAATGGAAGAAGGTGAAAAAAGAGTCGTCGAAGGATTTCGACCCCGGGTTTGTTGCCTGTCCTAGAGAGTTTGATTACAAAGAATTGAAATCTGCGACGAGGGAGTTTCATCCTAGTAGAATCGTTGGTCACGGTTCGTTTGGTACTGTGTATAAAGCGTTCTTCATATCTTCTGGAACGATTGCAGCAGTGAAACGATCGAGGCATTCTCACGAAGGGAAGACTGAGTTTCTGTCTGAATTGTCCATCATTGCTGGCTTAAGGCACAAGAATTTGGTTCAGTTGTTGGGTTGGTGTGTTGAGAAAGGTGAGCTGCTGCTTGTTTATGATTTCATGCCTAATGGAAGCTTAGACAAGATGCTTTACAAAGAACCCGAAAGGGGGAAGTTGTTGACTTGGTCTAATAGGTTTAACATTGTTGTTGGTTTAGCTTCTGTTTTGGTTTATCTTCATCAAGAATGTGAGCAAAGAGTGATTCATAGAGACATCAAAACCGGGAATGTTTTGCTCGACGGGAATTTCAATGCTAGGTTGGGTGATTTCGGATTAGCTAAACTCATGGATCATGATAAGAGTCCTGTTTCAACTTTAACTGCTGGAACAATGGGATACCTCGCACCTGAATATCTTCAATATGGTAAAGCTACTGATAAAACCGACGTTTTCAGCTACGGCATTGTTGTGCTTGAAGTTGCTTGTGGGAAAAGGCCTATCGAAAGAGAGGGTCAAAAGATGGTTAACTTGGTGGATTGGGTTTGGGGATTGTATTCCGAAGGGAAGATAACCGAGGCAGTTGATAAGAGGTTGAATGGTGAGTTTGAGGTTGAGGAGATGAAGAAGCTTTTGATGTTGGGGTTGAGTTGTGCTAATCCTGATAGTGCTGAGAGACCTACTATGAGAAGAGTATTGCAGATTCTTAACAATGAAGTTGTGCCATTTGCTTTGCCAAAAGTAAAACCAACCTTAACTTTCTCATCTGATTTGCCATTGAGTATTGATGAGATTGTTTGTGATGAGGGTGGTGAAGATTGTCAAGAGTTCAATACTAATCAGTCTATGTGTGAGATTAAAATTGATTGA 2019 0.417 MHPFKPTLFTLFSTFILAAAGNIQLNFPYFTTTNITFTGDSSLTNRLISLTKPTPLSTGSILYNNPIPLFDKQTNTTSSFSTTFSFSITNPNNPTSFGDGFCFFLSPNNLSSTSSFSSSFSPFGLPTNFVAVEFDTRFDPRFNDPNENHIGFNIDSLNSLRTVDPIFNGIDLKSGNTITSWIDYKTDQNSLSVFLSYSGIKPLEPILFVNVDLSEYFRDNQDVYVGFSASAEKSTELHQIESWRFYTIGFEPVRPRLRSYNVSDNSVIGNAIKGNVHRSRSSNSKKRLGFGFAVAGPVFFCAVFSLLGYYSFVKWKKVKKESSKDFDPGFVACPREFDYKELKSATREFHPSRIVGHGSFGTVYKAFFISSGTIAAVKRSRHSHEGKTEFLSELSIIAGLRHKNLVQLLGWCVEKGELLLVYDFMPNGSLDKMLYKEPERGKLLTWSNRFNIVVGLASVLVYLHQECEQRVIHRDIKTGNVLLDGNFNARLGDFGLAKLMDHDKSPVSTLTAGTMGYLAPEYLQYGKATDKTDVFSYGIVVLEVACGKRPIEREGQKMVNLVDWVWGLYSEGKITEAVDKRLNGEFEVEEMKKLLMLGLSCANPDSAERPTMRRVLQILNNEVVPFALPKVKPTLTFSSDLPLSIDEIVCDEGGEDCQEFNTNQSMCEIKID 672
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02564 672 ProSitePatterns Serine/Threonine protein kinases active-site signature. 471 483 IPR008271 GO:0004672|GO:0006468
Vivi7g02564 672 FunFam L-type lectin-domain containing receptor kinase VIII.1 312 424 - -
Vivi7g02564 672 Pfam Protein kinase domain 350 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02564 672 SUPERFAMILY Concanavalin A-like lectins/glucanases 23 248 IPR013320 -
Vivi7g02564 672 SMART serkin_6 349 624 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02564 672 PANTHER - 35 623 - -
Vivi7g02564 672 ProSitePatterns Protein kinases ATP-binding region signature. 355 378 IPR017441 GO:0005524
Vivi7g02564 672 Gene3D - 21 252 - -
Vivi7g02564 672 ProSiteProfiles Protein kinase domain profile. 349 627 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02564 672 Gene3D Transferase(Phosphotransferase) domain 1 425 626 - -
Vivi7g02564 672 SUPERFAMILY Protein kinase-like (PK-like) 332 639 IPR011009 -
Vivi7g02564 672 CDD lectin_legume_LecRK_Arcelin_ConA 23 249 IPR001220 GO:0030246
Vivi7g02564 672 FunFam L-type lectin-domain containing receptor kinase VIII.1 425 637 - -
Vivi7g02564 672 Gene3D Phosphorylase Kinase; domain 1 311 424 - -
Vivi7g02564 672 ProSitePatterns Legume lectins beta-chain signature. 130 136 IPR019825 -
Vivi7g02564 672 CDD STKc_IRAK 355 621 - -
Vivi7g02564 672 Pfam Legume lectin domain 24 247 IPR001220 GO:0030246
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02564 Vivi-Chr7 89558504 89560560 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02564 16 655 Receptor kinase-like Gene Family AT5G55830 58.094 0.0 737
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Vivi7g02564 Pkinase 8.2e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02564 - - adu:107496163 857.055