Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02530 ATGGAAAATCTTAGAGAAGATGAGATTGAGGACAACATGTCAATGTCACCGCCTTCCGTCGGTTCCATGCAGATTGCAGGAAGCAATGGCTTTGGTCACAGCATGGAGTTCATGTCTCAGGCATACCTTCACAATCGGTACCCAGAGATTGATATTCAAGTCGCGGATTCCACTTTCAACCAAGATCCTCCTCTCCCTGTATTTCTCAAGTTTGAAGATGTAGAGTTCAAAGTGCGAAATAGCCAAGTAGCTTCCAAGAATCCTGTGAAAACAATGGTGTCAAAGGTAGCCACGCCAAACAATGTGGAAGAGAAAAACAAATACAAGAAAATTCTAAAAGGTATCACCGGAAGCATTGGCCCGGGCGAAATCCTCGCTTTGATGGGTCCTTCTGGTAGTGGAAAGACGACATTGTTGAGAGTTGTAGGAGGAAGATTACTTGATAATGTTAAGGGAAAGATAACTTACAATGATGTACCATATAGTCCCGCGCTAAAAAGGAGGATTGGATTTGTAACACAAGAGGACGTGCTTTTTCCGCAACTTACAGTAGAAGAAACATTAATCTTCTCTGCATTCTTAAGGCTACCAACCAACATGAGCAAGCAACAAAAATATGCAAGAGTTGAGAACACTGTCAAGGATCTAGGCCTAGAAAGATGTCGCCACACGAAAATAGGTGGAGGATATCTCAAAGGTATATCAGGAGGAGAAAGGAAGAGAACCTGCATAGGTTATGAAATTCTTGTTGATCCTTCATTGCTGCTACTTGATGAACCAACTTCAGGCCTTGATTCCACGTCGGCAAACAAACTCCTTCTTACCCTTCAGGGACTTGCCAAGGCTGGAAGAACTATAATCACAACAATTCATCAGCCATCGAGCAGAATCTTTCACATGTTTGACAAACTTCTTCTGATAGCAGAAGGACATCCTGTTTATTATGGAAAGGCAAAAGACACAACTGAGTACTTTTCATCATTGAGATTCATCCCGGAAATACCGATGAATCCCGCAGAGTTTTTGCTTGACTTAGCAACTGGACAAGTGAATGATATAAGTGTTCCTCGAGATATTTTCAAAGATCAAGAATCTTCTGACCCTTCAGCAGCTGTTATTAAGTATGTACAACTCAAGTATAAAGACATATTGGAGCCAAAAGAAAAACAAGAGAATCATAGAGGAGCAAGCACACCAAAACATCTTCAACTAGCCATTCAGGTTAAAAAGGAATGGACACTGAGTTGGTTAGACCAATTCATTATACTTTATAAGAGAACATTCAGAGCAAGATGCAAGGACTATTTTGATATATTAAGACTAGTTCAAGCTGTTGGAATCGCACTTTTGTTAGGACTACTTTGGTGGAAATCTTCAATTGATACAGAAGCTCAACTCCGAGATCAGGTTGGTTTAATGTTCTACATTTGTATATTTTGGACATCTTCATGTATTTTTGGAGCAGTCTATGTATTTCCATTTGAAAAAGTGTACTTAAGAAAAGAAAGGAAAGCAGACATGTATAGACTAAGTGTATACTATGCAAGTAGCACTCTCTGTGACATGGTGGCACATGTTTCGTATCCTACTTTTTTCATGCTCATTGTGTACTTCATGGCTGGGTTTAAGAGCACGGTGGCTTGCTTCTTCCTTACGTTATTCGCGGTTTTGCTGATAGCTATAACAAGTCAAGGAGCTGGAGAACTATTTGGAGCTGCGGTTATGAGCATTCAAAGAGCAGGAATGGTTGCTTCTTTGATACTCATGTTGTTCCTTCTTACAGGTGGCTACTATGTTCAGCATATACCAAAGTTCATGCAATGGTTGAAGTATATGTCATTCATGTACTATGGATTCAGGCTTCTTCTAAAAGTGCAATATTCAGGAGATGAACTATATGAATGTGAAAGTGAGGATGGATGCAAGACACTTCAAAGTTCACCTTCATTTGATACTGTAAATTTGAATGGAGGTTTAACAGAAGTTTGGGTTCTGTTAGCCATGGCTCTTTGCTTTAGAGTGTTTGCTTACTTTTGTCTACGTAGAAGGATTGACATATCCAATTAG 2067 0.3982 MENLREDEIEDNMSMSPPSVGSMQIAGSNGFGHSMEFMSQAYLHNRYPEIDIQVADSTFNQDPPLPVFLKFEDVEFKVRNSQVASKNPVKTMVSKVATPNNVEEKNKYKKILKGITGSIGPGEILALMGPSGSGKTTLLRVVGGRLLDNVKGKITYNDVPYSPALKRRIGFVTQEDVLFPQLTVEETLIFSAFLRLPTNMSKQQKYARVENTVKDLGLERCRHTKIGGGYLKGISGGERKRTCIGYEILVDPSLLLLDEPTSGLDSTSANKLLLTLQGLAKAGRTIITTIHQPSSRIFHMFDKLLLIAEGHPVYYGKAKDTTEYFSSLRFIPEIPMNPAEFLLDLATGQVNDISVPRDIFKDQESSDPSAAVIKYVQLKYKDILEPKEKQENHRGASTPKHLQLAIQVKKEWTLSWLDQFIILYKRTFRARCKDYFDILRLVQAVGIALLLGLLWWKSSIDTEAQLRDQVGLMFYICIFWTSSCIFGAVYVFPFEKVYLRKERKADMYRLSVYYASSTLCDMVAHVSYPTFFMLIVYFMAGFKSTVACFFLTLFAVLLIAITSQGAGELFGAAVMSIQRAGMVASLILMLFLLTGGYYVQHIPKFMQWLKYMSFMYYGFRLLLKVQYSGDELYECESEDGCKTLQSSPSFDTVNLNGGLTEVWVLLAMALCFRVFAYFCLRRRIDISN 688
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02530 688 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 56 675 - -
Vivi7g02530 688 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 107 326 IPR027417 -
Vivi7g02530 688 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 97 334 IPR003439 GO:0005524
Vivi7g02530 688 SMART AAA_5 121 311 IPR003593 GO:0016887
Vivi7g02530 688 FunFam ABC transporter G family member 22 100 328 - -
Vivi7g02530 688 Pfam ABC-2 type transporter 419 627 IPR013525 GO:0016020|GO:0140359
Vivi7g02530 688 Gene3D - 99 329 IPR027417 -
Vivi7g02530 688 Pfam ABC transporter 112 262 IPR003439 GO:0005524
Vivi7g02530 688 Pfam ABC-2 type transporter 291 351 IPR043926 GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02530 Vivi-Chr7 89212968 89216776 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02530 110 295 Calmodulin-binding Proteins AT2G36910 31.414 2.03e-13 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02530 K05681 - gmx:100815259 1200.65