Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02529 ATGAATTCTAGGTGTTTGTTGAATTCCAACAGCATGGTTCAATCTTCGAATTCTGCAGGTGAAGATGAAAGAGTGGATGGTTCTAGAAATAGCCATCGGCCTGGACGTGTCTCGTTGCCGTTGACGCCTTCGTTTTCAGTTCGGATGGCTATGAGAATATCTAGATCAAGATGGTTTACTTTTCTAAGAAGAGTTTTTCATTATCAGAATGGGTCGAGGTCTAGTCTTGGCTCGAATCCTTTCAATTCTAGTACTTGGTTGATGTTGGAGTTTAGTGCTTTAATTGTACAAATAATCGTTTCTACGTTCACTTTGGCTATTTCGAATATGGAGAAACCTGTTTGGCCTATGAGGGTATGGATATCTGGTTATGATATTGGATGTGTTCTTAATTTGCTTGTGGTTTATGGACGGTACCGACAAATTTATCTGATTCAAGGAGATGCTGTAAGCCTTTCGAATATGGAGCAACAGAGAAACAGTGAAGACACAAGTGTATACAGGATGTCACACTTGATGCACAAATGCAGGACTTCATTGGAGCTTTTCTTTGCCATATGGTTTGTGATGGGAAATGTTTGGGTTTTCGACTCACGTTTCGGTTCATTTCAACAAGCTCCAAAACTTCATGTCCTCTGCATCACTTTGCTTACTTGGAATGCAATCTGTTACTCTTTCCCTTTCCTACTTTTTCTTTTGTTATGTTGCTGCGTGCCACTGATTAGCTCCCTCCTCGGATACAACATGAACATGGCATCTTCTAACAAAGGAGCATCTGATGAACAAATCTCACAACTTCCAAGTTGGATACATAAAGATCCTCATACCACAAAGTTAGATCTTGGAAACGACTCTGAAAGCATTGAAAATTTTATCAATGAAGATCCGGAATGTTGCATTTGCTTAGCCAAGTACAAAGACAACGAAGAGGTTAGAAAATTGCCATGTTCTCATGTGTTCCATTTAAAGTGTGTGGACCAGTGGCTGAAAATTATATCTTGCTGTCCACTTTGCAAACAAGGATTAGAGAGATAG 1035 0.3971 MNSRCLLNSNSMVQSSNSAGEDERVDGSRNSHRPGRVSLPLTPSFSVRMAMRISRSRWFTFLRRVFHYQNGSRSSLGSNPFNSSTWLMLEFSALIVQIIVSTFTLAISNMEKPVWPMRVWISGYDIGCVLNLLVVYGRYRQIYLIQGDAVSLSNMEQQRNSEDTSVYRMSHLMHKCRTSLELFFAIWFVMGNVWVFDSRFGSFQQAPKLHVLCITLLTWNAICYSFPFLLFLLLCCCVPLISSLLGYNMNMASSNKGASDEQISQLPSWIHKDPHTTKLDLGNDSESIENFINEDPECCICLAKYKDNEEVRKLPCSHVFHLKCVDQWLKIISCCPLCKQGLER 344
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02529 344 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 246 343 IPR013083 -
Vivi7g02529 344 MobiDBLite consensus disorder prediction 1 21 - -
Vivi7g02529 344 MobiDBLite consensus disorder prediction 1 37 - -
Vivi7g02529 344 ProSiteProfiles Zinc finger RING-type profile. 298 339 IPR001841 -
Vivi7g02529 344 Pfam Ring finger domain 297 339 IPR001841 -
Vivi7g02529 344 SUPERFAMILY RING/U-box 290 342 - -
Vivi7g02529 344 PANTHER C3H4 TYPE ZINC FINGER PROTEIN 20 341 - -
Vivi7g02529 344 SMART ring_2 298 338 IPR001841 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02529 Vivi-Chr7 89201449 89204539 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02529 45 342 C3H Transcription Factor Family AT4G26580 68.121 4.89e-141 401
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02529 - - gmx:100813670 540.421