Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02523 ATGTCTGCAAACTCTAAGAATCTGTCACTTTTCCTTCTCTTAATAAACTTTCTTTTCTTTTCATGTTGTAACTCTCTTCTTGATGAACAAGGTCAAGCTCTTCTAGCATGGAAGAAGAGTTTAAACACGAATTCAGACGCATTACCGTCTTGGAATGTTTCGAACAAAACTCCGTGCAACTGGTTCGGTGTGAAGTGCAATTTACAAGGAGAGGTAGAGGAGATAAGCCTGAAGTCATTGAACTTGCAAGGCTCGTCATTGCCTTCGAATTTTCAGCCTCTCAAGTCCTTGAAGGTTCTTGTCCTCTCGTCGATGAACATCACGGGAAGGATTCCGAAGGAATTTGGAGACTATCAAGAGCTTGTTTTCATTGATCTTAGTGAAAATTCTCTCTTTGGTGAAATCCCAGAAGAAATTTGCAGGCTAAGCAAGCTTCAAAGCTTAGCTCTTCATGCAAACTCTCTGGAAGAAAATATTCCTTTCGATATAGGAAATTTATCGAGTCTCGTGAACTTGACACTCTTTGATAATAAACTCAGTGGCGAAATTCCAAAGAGTATTGGCTTGTTAACTAAGCTTCAAGTATTCAGAGCAGGAGGGAATAAAAACCTCAACGGTGAGCTTCCATCGGAGATCGGAAACTGCACTGACTTGGTCGTATTAGGCCTTGCGGAAACCAGCATTTCCGGTAGTATTCCTTCCTCAATAGGAATGCTGAAAAAATTACAGACCATAGCCATTTACACAACTAAGCTATCAGGCTCTATACCAGAAGAGATAGGAAATTGCAGTGAGTTGCAGAATCTCTATTTGTACGAAAACTCAATTTCCGGTTCAATTCCACGTCAAATCGGAGAGCTAGGAAAGCTTCAGAGTCTACTTTTATGGCAAAACAAGATAGTAGGGACGATTCCCGAAGAGCTTGGAAGATGCAAAGATCTCAGTGTCATAGATTTGTCAGAAAATCTTCTCACAGGTAGCATTCCAATCAGTTTTGGAAAGCTATCGAATCTTCAAGCACTTCAGCTGAGTGTTAATCGGTTGTCCGGTATTATACCACCCGAGATTTCAAACTGCGCGTCTCTGTCGCAGCTTGAAGTTGACAACAATGCTATTTCTGGTGAGATTCCTTCTGTTATTGGAAAATTGAGAAGCTTGACACTTTTCTTTGCATGGAAGAATAAGCTAACAGGAAAAATTCCGAATAGTCTTTCCGAGTGCGAAAATCTTCAAGCACTTGATCTATCATACAACCGCTTAACCGGTACAATACCGAAAGAACTATTTGTGTTGAAAAATCTAACTCAACTTATGCTTCTTTCCAATGATTTGGAAGGATTCATACCACCTGATATCGGTAACTGCACGAGTCTTCGCAGGTTGAGGCTAAATCGGAATAGACTTGTTGGTATTATTCCATCTGAGATTGCGAATTTGAAGAGTTTGAATTTTTTGGACTTGAACAACAATCATCTTGTAGGGGAGATTCCTTCAACAATATCAAGATGTCGGAATCTTGAGTTTATTGATCTCTCACACAACAAGCTCTCGGGGAATTTAGATGCTGTATCTAATCTTCAGAGTCTTGTTTCTTTGAATGTTTCCTTCAACAAATTCTCGGGTGAATTGCCTAACACGCCATTCTTCAGAAAACTCCCTCTCAGTGATCTCACTGGAAATAGCATATCAAAAGCCAAAGATGATACCAAATTAGCTATGATGATTATATTGTTCATTTTGTTAAGCACAAGTGCAGTACTTGCACTTTTCCTAATCCACGTCGCGATTCGTGCTTATATTGCTAACAATATAAATAACAGTTGGGTGATGACTTTGTACAACGACCATTTTTTCTCTGCCGACGACGACGTTGTCAAGAATTTAAAACCATCCAACGTGATTGACACCGGAAGCTCTGGAGTTTCGTACAAGGTGAAAACTCCAAAAGGCCAAATTATAGCAGTTAAAAAGACGTTGCCATCAACAGATTCTGAAGCACTTATGTCGGAAATTGATATGCTATGTTCAATCAAACACAAGAATATCACCAGGCTTCTTGGTTGGGGATTGAATCTTCTGAATAATAAGGATATGATGCTGCAGTTTTATGAATACCTCCCTAGTTTGAGCTCAGTGCTTCATGGTTCAGAAAAGGGAAAGTTAGAATGGGATACCAGATATGAAATCATCTTAGGTGTGGCTCAAGCACTTACCTATTTGCACCATGATTGTGTGCCTTCTATGCTGCATGCAGATGTCAAAGCAACAAATGTGCTATTAGGCCCTGGATATCATCCTTACCTTACTTGCTTTGGCCTTGTAAAAATCGCAAGTGAGAAAGTCGATGATGCTAAATCCAATCCAGTTCAAAGACCTACCTACACAAGCAGCTCCTATGGATACATAGATCCTGAGCTCGACTCAATGCAGAAGATCAATGAGAAAACCGACGTGTACAGTTTCGGCGTGGTGATACTCGAGGTACTGACAGGAAAGCATCCATTAGATCCAAGTCTGCCAGAAGGAGTACACTTGGTTCAATGGGTTAAGAGTCACTTGGCTAGCAAAAGAGATCCATTTGAAATTCTCGACTCAAATCTGAGAGGAAGTACTAAACCTACTACTATGCATGAAATACTACAAACTCTAGCTGTGTCGATTTTGTGTGTCAATACGAAAGCTCATGAACGTCCAACAATGAAGGATACTCTCGCAATGCTAAACCAATTTCGATATTTTGTTTAG 2745 0.4011 MSANSKNLSLFLLLINFLFFSCCNSLLDEQGQALLAWKKSLNTNSDALPSWNVSNKTPCNWFGVKCNLQGEVEEISLKSLNLQGSSLPSNFQPLKSLKVLVLSSMNITGRIPKEFGDYQELVFIDLSENSLFGEIPEEICRLSKLQSLALHANSLEENIPFDIGNLSSLVNLTLFDNKLSGEIPKSIGLLTKLQVFRAGGNKNLNGELPSEIGNCTDLVVLGLAETSISGSIPSSIGMLKKLQTIAIYTTKLSGSIPEEIGNCSELQNLYLYENSISGSIPRQIGELGKLQSLLLWQNKIVGTIPEELGRCKDLSVIDLSENLLTGSIPISFGKLSNLQALQLSVNRLSGIIPPEISNCASLSQLEVDNNAISGEIPSVIGKLRSLTLFFAWKNKLTGKIPNSLSECENLQALDLSYNRLTGTIPKELFVLKNLTQLMLLSNDLEGFIPPDIGNCTSLRRLRLNRNRLVGIIPSEIANLKSLNFLDLNNNHLVGEIPSTISRCRNLEFIDLSHNKLSGNLDAVSNLQSLVSLNVSFNKFSGELPNTPFFRKLPLSDLTGNSISKAKDDTKLAMMIILFILLSTSAVLALFLIHVAIRAYIANNINNSWVMTLYNDHFFSADDDVVKNLKPSNVIDTGSSGVSYKVKTPKGQIIAVKKTLPSTDSEALMSEIDMLCSIKHKNITRLLGWGLNLLNNKDMMLQFYEYLPSLSSVLHGSEKGKLEWDTRYEIILGVAQALTYLHHDCVPSMLHADVKATNVLLGPGYHPYLTCFGLVKIASEKVDDAKSNPVQRPTYTSSSYGYIDPELDSMQKINEKTDVYSFGVVILEVLTGKHPLDPSLPEGVHLVQWVKSHLASKRDPFEILDSNLRGSTKPTTMHEILQTLAVSILCVNTKAHERPTMKDTLAMLNQFRYFV 914
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02523 914 Gene3D Ribonuclease Inhibitor 385 577 IPR032675 -
Vivi7g02523 914 SMART LRR_typ_2 526 550 IPR003591 -
Vivi7g02523 914 SMART LRR_typ_2 335 359 IPR003591 -
Vivi7g02523 914 SMART LRR_typ_2 142 166 IPR003591 -
Vivi7g02523 914 SMART LRR_typ_2 407 431 IPR003591 -
Vivi7g02523 914 SMART LRR_typ_2 287 311 IPR003591 -
Vivi7g02523 914 SMART LRR_typ_2 479 503 IPR003591 -
Vivi7g02523 914 PRINTS Leucine-rich repeat signature 479 492 - -
Vivi7g02523 914 PRINTS Leucine-rich repeat signature 410 423 - -
Vivi7g02523 914 FunFam Leucine-rich repeat receptor-like tyrosine-protein kinase PXC3 706 912 - -
Vivi7g02523 914 Pfam Protein kinase domain 633 904 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02523 914 SUPERFAMILY Protein kinase-like (PK-like) 611 907 IPR011009 -
Vivi7g02523 914 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 426 520 - -
Vivi7g02523 914 Gene3D Ribonuclease Inhibitor 186 280 IPR032675 -
Vivi7g02523 914 FunFam LRR receptor-like serine/threonine-protein kinase RCH1 202 425 - -
Vivi7g02523 914 ProSiteProfiles Leucine-rich repeat profile. 505 527 IPR001611 GO:0005515
Vivi7g02523 914 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 22 - -
Vivi7g02523 914 ProSitePatterns Serine/Threonine protein kinases active-site signature. 748 760 IPR008271 GO:0004672|GO:0006468
Vivi7g02523 914 Pfam Leucine Rich Repeat 409 428 IPR001611 GO:0005515
Vivi7g02523 914 ProSiteProfiles Leucine-rich repeat profile. 409 431 IPR001611 GO:0005515
Vivi7g02523 914 Pfam Leucine rich repeat 314 372 IPR001611 GO:0005515
Vivi7g02523 914 SUPERFAMILY L domain-like 251 546 - -
Vivi7g02523 914 Gene3D Transferase(Phosphotransferase) domain 1 707 912 - -
Vivi7g02523 914 SMART serkin_6 628 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Vivi7g02523 914 PANTHER LEUCINE RICH REPEAT KINASE 2 204 909 - -
Vivi7g02523 914 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Vivi7g02523 914 Gene3D Ribonuclease Inhibitor 27 185 IPR032675 -
Vivi7g02523 914 Gene3D Ribonuclease Inhibitor 281 380 IPR032675 -
Vivi7g02523 914 SUPERFAMILY L domain-like 51 306 - -
Vivi7g02523 914 FunFam Leucine-rich receptor-like protein kinase family protein 27 189 - -
Vivi7g02523 914 Gene3D Phosphorylase Kinase; domain 1 619 705 - -
Vivi7g02523 914 ProSiteProfiles Protein kinase domain profile. 628 911 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02523 Vivi-Chr7 89150076 89155208 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02523 27 913 Receptor kinase-like Gene Family AT4G26540 46.505 0.0 810
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Vivi7g02523 Pkinase 5.5e-27 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02523 - - cam:101492613 1310.82