Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02496 ATGTCTTCTTCTTCTTCCTCCTCATCCTCTTCTTCTTCCTCCTCCTCATCATCACAACCAAATGTCACTTCTCACATCCAACCTTCTCCTCCTCCTCCTACTGATAACATTGACGCCCCTTCTTCCTCTCGTCAACGCTCCATGAATAATGAAGTCTGGCTTGAACCTGTTGTCGAAGCATTAGCCACTCAGGTTGCCATTGATGCTTCTCATTTTCATGGCCGTCTTTCTGCTGCTTCTGCTCTCGCCATTATTTTTCAGGTTTGTTCAACATGGAGGGAAGTGTCACGCTCGGATCTACTGTGGCAGAGGCTCACGAGACGCATCTGGCGCAGAACCTATAGATTGAGAGACACGTGGCAGCTAGAGTACATCTACTGGCATCGAACGGCTAGGAACTTCACAACAGGTAGACACGCTTTAGTTGTCCCACAATATGATCCAGGAGATCCTCACCAAACCCTCATCTGCCGTTGTCTCACTCTCTCCGACACTCACCTCGCCTGCGGCTTCGTCGACGGCACGGTTCGGCTATTCGATCTCACCACCGGTGCACACATTACAACCTTCTGGTCGAATCACGGTCATCTATTTGGTCCGTTCTCGCAATCCGTTTCGGGGATAGTAATTGCAAATTCCAACCTCACAACCATTGCGTTTGCGAGGTTAGATGGAGATGTGTACGTCGCGTTTATGAACAGGTCTGACATAATGCCCGGACCTATTGCAGCGCGACGTGCAATCTCCGGAGATGTTGTTAATAACGGAGTATTGGTGGAATTCGCGGGGTGTAGTCGTTGGTGGGTTGGTTTATTCGCCGGTCATGCCGGCGGGGCTTTTCAAATATGGGACGCGCTAACAGAACAGCGCGTGTTCGTTGGTGGTTCGTTAACCGATCCAGAAACGGTTCAAGGATGGCATATGTTAACCGAGTTAGTTGAACCGGTGGGTCGAGTAAGGGTAACAGAAAGAGAGTTTGTTGTTGCATGCACGAGTTCAAGATTGGTTTGTTTCAGCTTAAGAAACCCGGAGGTTTTATTACGTGACGTGGGGTCCACCACAGGTTTTGTTGTTGGTTCGTTGGATGTATGTCACGAGGTTTTTGTTGTGGTGGAAAGAAACGGTGTTGGAACGGTTAGGCGCGTGGGAGGTTTCGAGCGCGTGAGTAGTTTTAGTTTAAGAGGTTCGTGGTTGAGGGGTTTGTTGGGGTGCATGAATTTGGGGTATGTTATAACGTATTCTGGAGGGTCTGGTTTGTTGAGGGTTTGGGATATTCACGAGCGTAGGGCACGGTTGTGCATCACGCTCGGTGTTAGAGATGGCGGAGAAGGACAAGTTCATGGGAATAGTATGGTTGCGAATCAAACTCATGTGGCTATCTCTTCTAATGACTCTTCAATACATTTACTGGATTTTAGTGTACAGTGA 1428 0.4867 MSSSSSSSSSSSSSSSSSQPNVTSHIQPSPPPPTDNIDAPSSSRQRSMNNEVWLEPVVEALATQVAIDASHFHGRLSAASALAIIFQVCSTWREVSRSDLLWQRLTRRIWRRTYRLRDTWQLEYIYWHRTARNFTTGRHALVVPQYDPGDPHQTLICRCLTLSDTHLACGFVDGTVRLFDLTTGAHITTFWSNHGHLFGPFSQSVSGIVIANSNLTTIAFARLDGDVYVAFMNRSDIMPGPIAARRAISGDVVNNGVLVEFAGCSRWWVGLFAGHAGGAFQIWDALTEQRVFVGGSLTDPETVQGWHMLTELVEPVGRVRVTEREFVVACTSSRLVCFSLRNPEVLLRDVGSTTGFVVGSLDVCHEVFVVVERNGVGTVRRVGGFERVSSFSLRGSWLRGLLGCMNLGYVITYSGGSGLLRVWDIHERRARLCITLGVRDGGEGQVHGNSMVANQTHVAISSNDSSIHLLDFSVQ 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02496 475 PANTHER WD40 REPEAT PROTEIN 12, 37 11 455 - -
Vivi7g02496 475 MobiDBLite consensus disorder prediction 1 45 - -
Vivi7g02496 475 Gene3D - 134 475 IPR015943 GO:0005515
Vivi7g02496 475 MobiDBLite consensus disorder prediction 1 24 - -
Vivi7g02496 475 SUPERFAMILY WD40 repeat-like 156 471 IPR036322 GO:0005515
Vivi7g02496 475 SUPERFAMILY F-box domain 75 133 IPR036047 GO:0005515
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SAP Vivi7g02496 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02496 - - gmx:100781108 575.089