Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02493 ATGGAAGAAAATAAAGAGGAAGCGCTTAAGGCGATAGAGATTGCTGAGAAGAGATTTTCTCAGAGAGACTTTGAAGGTGCGAAAAACTATGCTTTAAAGGCGAAAACTCTTTGTCCTGACTTGAGTGGTGTATCTCAAATGGTGGCGACGTTTGAAGTTTATTTAGCTTCTGAGTTTAGACATAATGGGAAGCTTGATTATTATTCGGTTCTTGGACTGAAACCTACTGCAGATGAAGCGGCTGTCAAGAGAAAGTATAAGAAGTTGGCAGTGTTGCTTCATCCAGATAAGAACAAATGCGTTGGAGCTGATGGGGCGTTCAAGCTTGTTTCCGAGGCGTGGACTTGTCTCGACAATGCCATGCGTAGTTCTTATGATCTCAAGAGAAGTTATTCTTCTGTTGTTCAGGCTGCAGGTTATAACAACTGTTCCAATATGCCGCCGAACTCTTGTAGTAAACTCGACACCTTTTGGACAATCTGTACCGCTTGTAAGGTTCAGTATGAGTATATGCGCAAGTATGTCAATAAAAAACTCTCTTGTAAGAACTGCCGTGGCGTTTTTATTGCTGTTGAAACTGGTGCTGCTCCAGCAAATGGTTCATTTCCGTATCAACCTAGGCCATATGTGCCAGGAAATGGGTTTGGAAATCAATCAATTGATGGAGTTGCATATGCTCCGACTAATGCCGGCTATTTTAATGGGAATGGAGTCCCGGGATACCATTCTGGACACGGGTACGAGTATGTTTCAAATGTTTCGTTTCAGATGGGCTCTGCTGGTTTTATCCATCAAAATGGATCACCTACTGCTCTACCTACTGGTTCTGTTTATCCGGTCAATGGAAATGCAAAGCGAGGAAGACCAAAAGTCAAACCAGAAGTAGCTAATGGAAGGCATCCTATGTCGGAGACTATGGTCAACATAAACTCACATGTATCGTTCTCGTGTAATGAACTGCAGGAAGTTAAACTAGGTAGACCTGACAAGAAACGTAAACTTACGGTGGGAACCAGTTTCAGAAACGGATATGATGAAAAAGGGTCAAAATGTGCTTCAGAAGCAGTAGTGTCAAATGGAAATGATAGCGTTGGAAATAGCAGAAATGGCCAGAAGCTTTCTGGTGCAAGTGAAGTTCAAACCAAACACTGTTTCACTCCACCTGCATTTGATGCAAGAAAATTATTGATTGAGAAAGCCAGGACAGTAATTAAGAAGAAACTCGAAGAAATGAAGTTGTCATCCGAAGCTGCAGCTCTAAAAGAAAAAGAAAAGGCGCAGCTTCCGAATGATGTTTGTCTAGTCAAAAGAGAGACATGTAGGAAAGCACCTCCGAATGTTGTTTCTGGTCTTTCATTTGAACACAGGAAAGCCAATCCGATTTCAATAACTGTCCCGGATTCTGATTTTCACGACTTCGACAAAGATAGGACAGAGGAGTGTTTCCAGCCAAAGCAAATATGGGCCTTATATGATGAGGAAGACGGAATGCCACGATTGTATTGTCTGATCCGCGAGGTTATATCTGTTAATCCTTTTAAGATCCATATCAGTTACTTAAATTCCAAAACTGATACCGAGTTTGGCTCAGTAAACTGGCTTGAATCAGGTTTTACCAAATCTTGCGGAAATTTCAGGGCTTGGACTTCAGATATTGTCGACCAAGTCAACATATTTTCTCATGTTCTAAGCCGCGAGAAGGCTGGTCGAGGCGGTTGTGTTCGCATATATCCAAGGAGTGGAGATATCTGGGCTGTTTATCGAAATTGGTCTCCAGATTGGAACCATTCTACACCTGACAAAGTGAGGCATGAATACGACATGGTGGAGGTGCTGTATGATTACTCCGAGGATCTCGGTGTCTGTGTTACTCCTCTTATCAAGTTAGATGGATTCAAAACAGTATACAAGAGGAATCCAGACCAAAGTGCCGAAAGATGGATACCGAGAAGAGAAATGGTACGTTTTTCACATCAAGTTCCTTCTTGGTTGCTGAAAGGGGAGGAAAGCAAATTGCCGGATCGGTGTTTTGATCTTGATCCAGCTGCAACTCCGGACGAGCTTCTTCATACTGCTACAGAAGCAAAAGCTTTGTAG 2097 0.4249 MEENKEEALKAIEIAEKRFSQRDFEGAKNYALKAKTLCPDLSGVSQMVATFEVYLASEFRHNGKLDYYSVLGLKPTADEAAVKRKYKKLAVLLHPDKNKCVGADGAFKLVSEAWTCLDNAMRSSYDLKRSYSSVVQAAGYNNCSNMPPNSCSKLDTFWTICTACKVQYEYMRKYVNKKLSCKNCRGVFIAVETGAAPANGSFPYQPRPYVPGNGFGNQSIDGVAYAPTNAGYFNGNGVPGYHSGHGYEYVSNVSFQMGSAGFIHQNGSPTALPTGSVYPVNGNAKRGRPKVKPEVANGRHPMSETMVNINSHVSFSCNELQEVKLGRPDKKRKLTVGTSFRNGYDEKGSKCASEAVVSNGNDSVGNSRNGQKLSGASEVQTKHCFTPPAFDARKLLIEKARTVIKKKLEEMKLSSEAAALKEKEKAQLPNDVCLVKRETCRKAPPNVVSGLSFEHRKANPISITVPDSDFHDFDKDRTEECFQPKQIWALYDEEDGMPRLYCLIREVISVNPFKIHISYLNSKTDTEFGSVNWLESGFTKSCGNFRAWTSDIVDQVNIFSHVLSREKAGRGGCVRIYPRSGDIWAVYRNWSPDWNHSTPDKVRHEYDMVEVLYDYSEDLGVCVTPLIKLDGFKTVYKRNPDQSAERWIPRREMVRFSHQVPSWLLKGEESKLPDRCFDLDPAATPDELLHTATEAKAL 698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02493 698 PRINTS DnaJ domain signature 68 86 IPR001623 -
Vivi7g02493 698 PRINTS DnaJ domain signature 86 101 IPR001623 -
Vivi7g02493 698 PRINTS DnaJ domain signature 102 122 IPR001623 -
Vivi7g02493 698 SUPERFAMILY Chaperone J-domain 58 129 IPR036869 -
Vivi7g02493 698 Pfam DnaJ domain 66 126 IPR001623 -
Vivi7g02493 698 SMART dnaj_3 65 122 IPR001623 -
Vivi7g02493 698 PANTHER BNAC03G44070D PROTEIN 1 685 - -
Vivi7g02493 698 Gene3D DnaJ domain 56 144 IPR036869 -
Vivi7g02493 698 CDD DnaJ 66 119 IPR001623 -
Vivi7g02493 698 Pfam Domain of unknown function (DUF3444) 462 669 IPR024593 -
Vivi7g02493 698 ProSiteProfiles dnaJ domain profile. 66 135 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02493 Vivi-Chr7 88820880 88824219 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02493 4 293 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.618 3.70e-27 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02493 - - gmx:100792639 1051.2