Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02484 ATGTCCCAAACAAACATTTCTTCCGATGATGGCAATATAGAACTTGGTGCTAGCTTACTCATTACCGGTAGCAAATACAACAAGAAATGGCGAAAAAGTTTATATGTCGGAATCATGATCTCCTTGAAGAAGCCTACAACTTTTAGCAGCAACTTTGAAGAGTCTGCATCATCACCACTACTATACAATCCATTGCCTCATAGTCCTCCTGCTAGAACCTCATCAGCCAAATCTTTTGTTTCAATTGATGTAGTCTCTCATGTCCAAGACGACGTGGTAGAAGAACGTGTTAGGACTGATATTGCTAGAATTGTGAAGGAGAAGGACTTGAAATCTCTTCGTGAACTTGGTGGAGTAGGTAGAGTTTGCGATGTTCTGCATAGTCAAACTCAACACTCGTCAGAGGAGATCACTGAGAACCTTGGAGTTCAAGCAACCTTCTATGGCATTCTTTGGAAAAGCTGCAAGCAAAATCTTTACACAATTTCAATGTTGCTGATTTCGGCCTTATTATCCTTTGCCACGGAGTTTAAACAGGTTGGGCCTAGATATGGTTGGCATGATGGTGTTGCGATGATTTTTGCTGTTTTACTTCTGCTTGCATTCTCGTCAATTACTAGCTATTGGCGCGAAAGAAAAACAATCAAGTTGGCAAAGAAAAAAGGCAAGGCGGTGAAATTCAGTGTTAAAAGACATCAAGAGTCCCAATCAGTTGATCTTACTCTCTCCATGTATGACATTATGGTGGGTGACGAGGTGTATTTGAGTCCTCCTGATGAGGTTCCTGCAAATGGCTTGCTTTTGGGTAAAGACAACCTTGTGTTGGTTGAGGGAATAAAAAATGAAAAAATCGATTGTGAAGCGACGAACCCTTTTCTTATAGCCAGTTCAAAGGTGGTTGAAGGTCGTGGATGGATGCTTGTGACATCTGTTCAAAACAAATCAAACTCGTCTGAGATCAAGAGACGCCTTTTGGAAAATCTAATTGAGAAGCCAATTTCGTACCTTGACAAAGCTTCTCTTTTTATCTTTACACTTGTTGCACTTGTGTTGTTCATTCGTCTAATTTGTAAGAAAGACGGAGATGATGGCGGACTTCCAGATATTAAAGGGAATGTTTCAGTTGGCATGTTAACAAAACTCCTTGAAAATATTCTTTCAGGGCCACGAGGAAGGATTGCGATTTTAGCACATATTCTTAGTGTTATAGTACTATGTGTGCAACATGGAGTGCCACTGATGATTACTTTATCTCTCCGTTACCAAAATGATGAAGTATTGATTAATCAAGAGGTGGTTCTTAATGATTTGTCAGCTTGTACAACAATGGGGTTGGTAAATGTCATCTGCATCGATGTATCTGGTGGTGGACTTATATGTAAGCCAATGGAGGTCTGCGAAATATGGATAGGGGAAGGAGAGACTGACATAAACAATATTCAGGAGTCGGGAACAAGTCAAGTTGTACTAGAGAAGCTTAAAGAAGGAGTTTGTTTATCAGTTCTTGCACCAGGACTATCTCGTTCTCATGTGTCTAACTCACTTGTTTCTTGGGCAAACTCAACATTGGAAATGGACATTATATCTTTCAGAGAAGATTTTCACATTCTCAAGCATGGAAAACTGGATTCTAACCAAGAGGGCAATGGAGTTTTGGTGAGAAAAGTAAGTGCCAATGAACAAGATATGCACTTGCACTGGAGCGGGGATGCATCCATAGTGTTGGAAATATGTTCACAATATTATGATGGTGAAGGAACATGCCATTCCATTGAAAATCAGAAAATTAAATTTGAGCAAGTGATCCAAAAAATGGAGCGTAGTGGCCTTAAACCAATTGCATTTGCTTATAGACAAACACAGGTGCAGGAACTCAAGCAGGATGAGATGACGTTACTAGCACTAATAGGTCTCAAATACAAATGCCAAGTATCGACAAAACTAGCTTTGAAAAATCTTCAAAATAATGGAATGCGTATCAAATTGGTCTCAGAGGATGATGACATCATGGTACTGAATGACATGGCTTGTGAACTTGGAATGGAAGTGTCGATAGATGGTGGTCACCTTGAAGGAAAGCAACTTCGTGATTTGGATGAGAAAGCCAGATTGGTTAAAGTGGATAAAGCCATTGCAATGGGAAGTTTCAGTCCCATAGACAAGCTTCTAATGGTAAAGTGTTTGCAAGACAGAGGTGATGTGGTTGCATTTGTGGAACAAAGATTGATGACTAATCATATTTCAGATGTTCTAAAGTTAGCTGATGTAGGGATAATTAATCACTCTTTAAGCAAAATAATTGACAGAAAAGAGAATTCTGATATATCTATCATGTGTTTCAGTGTATTGGAAACAATCGTGAAGGTGGGAAGAAGTAAATATCGCAATATTCAAAAGTTCATTCAACTTCAGCTGACAATTGGTATATCAGGGTTACTCATAACCTTGATTACAACAATTCTCACAGGAAATTCTCCCCTAACAGCAATCCAATTGATTTGGGTGAATGCATTAATGTGTCCTTTGGGTGGCCTAATGATGGTGACGGAATTAAGTAGCGAGGAAGAGCTTGCCAAACTACCATCTCATAGGAATCAGTCAATAATAACAAAGAAAATGTGGAAAAATATAATTTTTCAGATTTTGTATCAGGCTTCTGCAATCATGATACTTGAATTTGGGGGACATGTATCTGACAGTGAAAAGCAATTAAGGAAAGTCATGATCTTCAATACATTCTTTTTATGTCAGCTCTTCCATCTGCTCAATATCATGGATTTATTGAAAACAGAAGTTTTCAAGGTTGATGTACAGAAGTATTGTTTCTTAGTGGCTTTAGGTTGTTGTTTTGTTTTGCAAACTGTGATTGTTGAGTATGCAAAAAGTCTAGCAGATTGCATGCGTCTGAATGCTACTGAATGGGCTATCTGTGTTCTAGTCAGTTCTGTTTCATGGGTACTTAAATGGACCTTGAAGAAGATTCTTTCAGGTTTTTTCAACACCAACTATACTTCACCCTTGGACTCTCCACAGTCTACCCCACAACCTTTGTTCTATCTTTATTGGGGACTTCCAGCTATGATGCTTCTTTTATTCCCTATAGGACTAGTAAGTATGAAACTTCATTGA 3129 0.3877 MSQTNISSDDGNIELGASLLITGSKYNKKWRKSLYVGIMISLKKPTTFSSNFEESASSPLLYNPLPHSPPARTSSAKSFVSIDVVSHVQDDVVEERVRTDIARIVKEKDLKSLRELGGVGRVCDVLHSQTQHSSEEITENLGVQATFYGILWKSCKQNLYTISMLLISALLSFATEFKQVGPRYGWHDGVAMIFAVLLLLAFSSITSYWRERKTIKLAKKKGKAVKFSVKRHQESQSVDLTLSMYDIMVGDEVYLSPPDEVPANGLLLGKDNLVLVEGIKNEKIDCEATNPFLIASSKVVEGRGWMLVTSVQNKSNSSEIKRRLLENLIEKPISYLDKASLFIFTLVALVLFIRLICKKDGDDGGLPDIKGNVSVGMLTKLLENILSGPRGRIAILAHILSVIVLCVQHGVPLMITLSLRYQNDEVLINQEVVLNDLSACTTMGLVNVICIDVSGGGLICKPMEVCEIWIGEGETDINNIQESGTSQVVLEKLKEGVCLSVLAPGLSRSHVSNSLVSWANSTLEMDIISFREDFHILKHGKLDSNQEGNGVLVRKVSANEQDMHLHWSGDASIVLEICSQYYDGEGTCHSIENQKIKFEQVIQKMERSGLKPIAFAYRQTQVQELKQDEMTLLALIGLKYKCQVSTKLALKNLQNNGMRIKLVSEDDDIMVLNDMACELGMEVSIDGGHLEGKQLRDLDEKARLVKVDKAIAMGSFSPIDKLLMVKCLQDRGDVVAFVEQRLMTNHISDVLKLADVGIINHSLSKIIDRKENSDISIMCFSVLETIVKVGRSKYRNIQKFIQLQLTIGISGLLITLITTILTGNSPLTAIQLIWVNALMCPLGGLMMVTELSSEEELAKLPSHRNQSIITKKMWKNIIFQILYQASAIMILEFGGHVSDSEKQLRKVMIFNTFFLCQLFHLLNIMDLLKTEVFKVDVQKYCFLVALGCCFVLQTVIVEYAKSLADCMRLNATEWAICVLVSSVSWVLKWTLKKILSGFFNTNYTSPLDSPQSTPQPLFYLYWGLPAMMLLLFPIGLVSMKLH 1042
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02484 1042 SUPERFAMILY Calcium ATPase, transduction domain A 240 321 IPR008250 -
Vivi7g02484 1042 SUPERFAMILY Metal cation-transporting ATPase, ATP-binding domain N 463 638 IPR023299 GO:0000166
Vivi7g02484 1042 SUPERFAMILY HAD-like 630 738 IPR036412 -
Vivi7g02484 1042 Gene3D - 266 473 - -
Vivi7g02484 1042 Gene3D - 615 773 IPR023214 -
Vivi7g02484 1042 Pfam Cation transporting ATPase, C-terminus 825 993 IPR006068 -
Vivi7g02484 1042 PANTHER CATION TRANSPORTING ATPASE 98 994 - -
Vivi7g02484 1042 SUPERFAMILY Calcium ATPase, transmembrane domain M 145 998 IPR023298 -
Vivi7g02484 1042 Gene3D - 774 1003 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02484 Vivi-Chr7 88761340 88764969 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02484 104 994 Primary Pumps ATPases AT3G22910 32.231 3.90e-119 389
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02484 K01537 - gmx:102661547 932.169