Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02483 ATGGCCACCTCTGCTATCCAACAATCAGCATTCACTGGTAAGACTGGTTTGAGGCAGGGAAATGAATTCATCAGGAAAGCTGGTAACTTTGGCCAAAGTCGCTTCACCATGCGTCGTACTGTGAAGAGTGCTCCTGAAAGCATTTGGTACGGTCCTGACCGTCCCAAGTACTTGGGTCCATTCTCTGAACAAATTCCATCATACCTGACTGGTGAGTTTCCTGGTGATTATGGATGGGACACAGCTGGATTATCAGCTGACCCTGAAACATTTGCAAGGAACCGTGAGCTTGAAGTAATTCACAGCAGATGGGCTATGCTTGGTGCATTGGGATGTACTTTCCCCGAACTCCTTGAAAAGAACGGTGTTAAATTCGGCGAGGCAGTGTGGTTCAAAGCCGGTTCCCAGATCTTTGCTGAGGGTGGTCTTGACTATTTGGGCAACCCCAACCTGATCCATGCTCAGAGCATTCTTGCAATCTGGGCTACTCAGGTTGTGCTGATGGGATTTGTTGAAGGCTACAGAGTTGGTGGAGGACCCCTTGGTGAAGGACTAGACCCACTTTACCCTGGTGGTGCTTTTGACCCTCTTGGTCTTGCTGATGACCCTGATTCATTTGCTGAGTTGAAGGTCAAGGAACTCAAGAACGGTCGGTTGGCTATGTTCTCCATGTTTGGTTTCTTTGTTCAAGCCATTGTTACTGGCAAGGGCCCTATTCAGAACCTTTACGACCATGTTGCTGACCCTGTCGCCAACAACGCATGGGCTTTCGCTACTAACTTTGTCCCCGGACAATAA 798 0.4875 MATSAIQQSAFTGKTGLRQGNEFIRKAGNFGQSRFTMRRTVKSAPESIWYGPDRPKYLGPFSEQIPSYLTGEFPGDYGWDTAGLSADPETFARNRELEVIHSRWAMLGALGCTFPELLEKNGVKFGEAVWFKAGSQIFAEGGLDYLGNPNLIHAQSILAIWATQVVLMGFVEGYRVGGGPLGEGLDPLYPGGAFDPLGLADDPDSFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPIQNLYDHVADPVANNAWAFATNFVPGQ 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02483 265 Gene3D Chlorophyll a/b binding protein domain 56 258 - -
Vivi7g02483 265 Pfam Chlorophyll A-B binding protein 66 231 IPR022796 -
Vivi7g02483 265 SUPERFAMILY Chlorophyll a-b binding protein 48 262 - -
Vivi7g02483 265 PANTHER CHLOROPHYLL A/B BINDING PROTEIN 8 264 IPR001344 GO:0009765|GO:0016020
Vivi7g02483 265 FunFam Chlorophyll a-b binding protein, chloroplastic 56 258 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02483 Vivi-Chr7 88746227 88747664 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02483 1 265 Chloroplast and Mitochondria Gene Families AT2G05070 84.906 1.88e-174 479
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02483 K08913 - gmx:100815789 507.679