Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02467 ATGATAATGCAGATTTTGTCCAACTGTATTGATGAAAAAAGGCTTCAAATACTGTTAAGCAGTGGCATAGTCAATACTCCACATTCAATTTGTCCGAAGGAGAGTAGATGTGTTGAAGAGTCTCTAGAACAATGCCCGGTTCGTGATGATTTCGTTGAGGCAAGGACTGGATTACCATTCTCATACCCGTGGAAAACATACGTGACATTGGATTTTGCGCCGTGGTCCAAGTTGGTTAATGTTTTGCTCTGTGGGATTGTTATTGTAATTATAATGTCGCTCAAGTTGTCTGGCTTCTGTTTAATAAGTAGGAGTCGAAGGGAGAAGCTAGGTCAAGATAATTCTACTGGTCAACACAAGCCGCTTCAACATTTGATGCATGGTCATTCGAAGGCTTCTGGGAGGTGGAGGAAAAAGTTGCTAGATATTTTCGTCTCACTTGGAATTGTCGGTTCCGTGTGGCTATTTTGGTACCTGAGTTCCGACATTGTGCAAAGAAGAGAAGAAATGCTTGCCACTATGTGTGATGAACGAGCTGGTATGCTGCAAGATCAATTTAACGTGAGCTTGAACCATGTTCACGCTCTCGCTATTCTTGTGTCTACGTTTCATCATGGTAAACATCCTTCTGCAGTTGACCAGAATATTTTCGGAGAATATACCGAGAGTTCCGCGTTTGAGAGACCACTTACTAGTGGCGTTGCTTATGCTTTGAAAGTTCTGCATTCAGATAGGATGAATTTTGAGAAGCAGCATGGGTGGACAATTAAGAAAATGGAAACCGAGAACGAGGCATTAGTTCAAGATTGTATTCCAGAAAACTTGGATCCGGCGCCCATTCAAGATGAATATGCACCGGTCATATTTGCTCAAGAAACTGTTTCTCATATTGTATCTATTGACATGATGTCAGGGAAGGAAGATCGGGAGAATATTTTGCGAGCAAGGGCTTCCGGAAAGGGTGTTCTGACATCCCCTTTCAAGCTTCTAAAGTCTAACCACCTAGGCGTTGTGCTTACATTTGCTGTCTATGGCTCTAAGCTTCCTCCAGATGCTACACCCGAACAGCGTATCGAAGCTACTGTCGGGTATTTGGGCGCATCTTATGATGTTCCATCACTTGTGGACAAGCTTCTTCACCAACTTGCCAGCAAGCAAACCATTGTTGTTAATGTTTATGACACAACTAATGCATCTGCGTATATTACAATGTATGGTACCGATGTTGTTGATACTGGCCTACTACACGTAAGCGGTCTAGATTTTGGGGATCCGCTACGAAAACATGAGATGCATTGCAGGTTCAAGCATATGCCTCCATTTCCTTGGATGGCATTCAATGCATCTGTGGCGGTATTTGTTATTACCTTGCTTCTTGGACATATATTTCATGCGGCAATAAATCGAATAGCTCAAGTAGAGGATGACTATCGTCGGATGAAAGAGCTCATGGTTCGCGCTGAGGCTGCAGATGTCGCAAAATCTCAGTTTCTTGCGACAGTTTCGCATGAGATCAGGACTCCAATGAATGGTGTTTTAGGTATGCTGCAAATGTTGATGGATACTGACCTCGATGACAATCAGATCGATTGTGCCCAAACTGCTCATGACAGTGGTAAAGATCTTATATCGGTCATAAGTGAGGTTCTTGAACAAGCTAAGATCGAAGCAGGAAGACTTGAACTCGAATCTGTAGCTTTTCATCCACATGCTATTCTCGATGAAGTTCTATCACATTTCTCTGAAAAAGCCATTGAAAAACGAATTGAGTTGGCTGTTTACGCGTCCAACCAAGTACCTCAGGTTGTCATCGGCGATCCTAAACGCTTCCGGCAAATAATTACCAATCTTGTCGGAAACTCACTTAAGTTCACTCACGATAAAGGACATGTTTTTGTGTCGATTCATCTTTCAAACGAAGTGAAGAATCCACTTCATATCATGGATCCAGTGCTGAGAGAAGGCTTAAACACGAGCCACGATATATCAGAAGGATCATGTAACACGTTGAGTGGATTTCCTGTAGGCAACAGATGGAAAAGCTGGGAAAATTTTAAGAAGTTAAATTTGGCGGATGAATCTGAAACTATTCAACTACTAGTAACGGTTGAGGACACTGGTATCGGAATTCCTACCGATGCACAAAGCCGCATATTTACACCTTTTATGCAGGCTGATAGTTCTACATCTCGAACATACGGTGGAACTGGAATAGGATTGAGCATTAGTAAATGTCTAGTTGACCTCATGGGAGGAGAAATTGGATTTGTAAGTGAGCCTGAAATCGGAAGTACTTTTTCGTTTACTGGAAATTTCAGAAAAGGAGTAACCGAATCTCGGGATGATAAGTTGCAGAAGAACAATCCCGAGTTTCAAGGATTGAAAGCATTAGTAGTAGATAGAAGAAAAGTTCGAGCCGAGGTTACACGATATCACCTACAGAGGTTAGGGATGTGTGTGGATGTAAAATTCCATCTATCCGAAACTTGCAACTCAAGTATGTCAGTACAGTTGGCCATGATTCTTATAGAGAAGGATTCTTGGGACAAGGAAAGTAGTAGCTTATTTGAAATCAAGAAACACGAACACAATGGCATCAAAGAGGACCCGTTAAAATTTTCAAAGATTTTTCTCCTGTCCGCCCATCTAAGCTTCAGCGAACGCAACGAGCTAAAGTCAGTTGGTATCATAGATGATATACTAATGAAGCCTCTTTGGCTAAATGCTTTGATTCGATACTACAGGTCATCGTCCGGAGCTGGGAGAAAGCAAATCACTAGAAAGAAATTATCCAAACTTGGAAATTTATTAACACACAAACGAATTTTGGTGGTTGATGATAATGCGGTGAACCGAAAAGTTGCAGAAGGTGTTCTGCGAAAATACGGAGCAGTAGTAACCTGTGTTGAGGGCGGTAAGGTTGCTCTAAAGATGCTTAAACCACCGCATAATTTTGATGCTTGTTTCATGGATCTCCAAATGCCAGAAATGGATGGTTTTGAGGTGACGAGGCAAATCCGGTATATGGAGAACGAGGTAAATGAAAAACTCGCTCGCGGGCAAGCATCGGCAGAGACTTTTGGCAACAATTCTCATTGGCACACTCCAATATTAGCTATGACAGCTCATGTAACTCCGGCATCAAATGAAGAATGCAAAAAATGTGGGATGGACGACTACGTGTCAAAGCCATTCGAAGAAGAGCAACTCTATATGGCAGTCGCACGCGTCTTCAATTTCGGGTCATAG 3249 0.4223 MIMQILSNCIDEKRLQILLSSGIVNTPHSICPKESRCVEESLEQCPVRDDFVEARTGLPFSYPWKTYVTLDFAPWSKLVNVLLCGIVIVIIMSLKLSGFCLISRSRREKLGQDNSTGQHKPLQHLMHGHSKASGRWRKKLLDIFVSLGIVGSVWLFWYLSSDIVQRREEMLATMCDERAGMLQDQFNVSLNHVHALAILVSTFHHGKHPSAVDQNIFGEYTESSAFERPLTSGVAYALKVLHSDRMNFEKQHGWTIKKMETENEALVQDCIPENLDPAPIQDEYAPVIFAQETVSHIVSIDMMSGKEDRENILRARASGKGVLTSPFKLLKSNHLGVVLTFAVYGSKLPPDATPEQRIEATVGYLGASYDVPSLVDKLLHQLASKQTIVVNVYDTTNASAYITMYGTDVVDTGLLHVSGLDFGDPLRKHEMHCRFKHMPPFPWMAFNASVAVFVITLLLGHIFHAAINRIAQVEDDYRRMKELMVRAEAADVAKSQFLATVSHEIRTPMNGVLGMLQMLMDTDLDDNQIDCAQTAHDSGKDLISVISEVLEQAKIEAGRLELESVAFHPHAILDEVLSHFSEKAIEKRIELAVYASNQVPQVVIGDPKRFRQIITNLVGNSLKFTHDKGHVFVSIHLSNEVKNPLHIMDPVLREGLNTSHDISEGSCNTLSGFPVGNRWKSWENFKKLNLADESETIQLLVTVEDTGIGIPTDAQSRIFTPFMQADSSTSRTYGGTGIGLSISKCLVDLMGGEIGFVSEPEIGSTFSFTGNFRKGVTESRDDKLQKNNPEFQGLKALVVDRRKVRAEVTRYHLQRLGMCVDVKFHLSETCNSSMSVQLAMILIEKDSWDKESSSLFEIKKHEHNGIKEDPLKFSKIFLLSAHLSFSERNELKSVGIIDDILMKPLWLNALIRYYRSSSGAGRKQITRKKLSKLGNLLTHKRILVVDDNAVNRKVAEGVLRKYGAVVTCVEGGKVALKMLKPPHNFDACFMDLQMPEMDGFEVTRQIRYMENEVNEKLARGQASAETFGNNSHWHTPILAMTAHVTPASNEECKKCGMDDYVSKPFEEEQLYMAVARVFNFGS 1082
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02467 1082 Pfam His Kinase A (phospho-acceptor) domain 493 558 IPR003661 GO:0000155|GO:0007165
Vivi7g02467 1082 Pfam Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase 605 769 IPR003594 -
Vivi7g02467 1082 Gene3D - 159 211 - -
Vivi7g02467 1082 Pfam CHASE domain 211 405 IPR006189 -
Vivi7g02467 1082 PANTHER TWO-COMPONENT HISTIDINE KINASE 173 1071 - -
Vivi7g02467 1082 Gene3D CHASE domain 212 438 IPR042240 -
Vivi7g02467 1082 SUPERFAMILY CheY-like 938 1079 IPR011006 -
Vivi7g02467 1082 Gene3D - 461 556 - -
Vivi7g02467 1082 SUPERFAMILY CheY-like 790 914 IPR011006 -
Vivi7g02467 1082 SUPERFAMILY Homodimeric domain of signal transducing histidine kinase 479 559 IPR036097 GO:0000155|GO:0007165
Vivi7g02467 1082 SMART HisKA_10 493 558 IPR003661 GO:0000155|GO:0007165
Vivi7g02467 1082 CDD REC_hyHK_CKI1_RcsC-like 942 1074 - -
Vivi7g02467 1082 ProSiteProfiles CHASE domain profile. 208 432 IPR006189 -
Vivi7g02467 1082 ProSiteProfiles Response regulatory domain profile. 941 1078 IPR001789 GO:0000160
Vivi7g02467 1082 Gene3D - 557 774 IPR036890 -
Vivi7g02467 1082 PRINTS Bacterial sensor protein C-terminal signature 699 713 IPR004358 GO:0016310|GO:0016772
Vivi7g02467 1082 PRINTS Bacterial sensor protein C-terminal signature 734 752 IPR004358 GO:0016310|GO:0016772
Vivi7g02467 1082 PRINTS Bacterial sensor protein C-terminal signature 717 727 IPR004358 GO:0016310|GO:0016772
Vivi7g02467 1082 CDD HisKA 493 554 IPR003661 GO:0000155|GO:0007165
Vivi7g02467 1082 SMART REC_2 940 1074 IPR001789 GO:0000160
Vivi7g02467 1082 SMART HKATPase_4 605 774 IPR003594 -
Vivi7g02467 1082 FunFam Histidine kinase 4 212 439 - -
Vivi7g02467 1082 SMART CHASE_2 208 407 IPR006189 -
Vivi7g02467 1082 Coils Coil 470 490 - -
Vivi7g02467 1082 ProSiteProfiles Histidine kinase domain profile. 500 774 IPR005467 -
Vivi7g02467 1082 FunFam Histidine kinase 4 465 556 - -
Vivi7g02467 1082 Gene3D - 935 1080 - -
Vivi7g02467 1082 Pfam Response regulator receiver domain 942 1074 IPR001789 GO:0000160
Vivi7g02467 1082 CDD HATPase_EvgS-ArcB-TorS-like 610 769 - -
Vivi7g02467 1082 SUPERFAMILY ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase 548 769 IPR036890 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02467 Vivi-Chr7 88525158 88529810 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02467 73 1078 Miscellaneous Gene Families AT5G35750 63.376 0.0 1274
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Vivi7g02467 CHASE 1.4e-32 CL0165
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02467 K14489 - gmx:100805107 1608.19