Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Vivi7g02460 ATGCAGGCATCGGAGCGGCATAGAAGTATGAGTATGTACTATCAGCCATTGCAGCAAATTGAGTCCTATTGCTTGCCGCAGTATCGAAATCTAAATCATCAGCTATACAACAATGATGGAGGCAATGGAACTCACTTCTCAGCTCCAAATTCTTCTGACTTTTACTGCACGTTGGAGTCGTCTTCTGCAGCTGGAAGTTTTGCGGTTTACAACTCTCCTTCGACTGTTAGTTTCTCGACTAATGATAGTCCTATGTCGCAGCAAGATTGTCAGACGTGTCCACAAGATCGTTATCACTCCCCCGATGATACCTATGACTCGCCGATGAGTGGATCCTGCGTAACCGAAGATTTAAGTAGCTTCAAGCACAAGCTAAGAGAATTGGAAAATGTGATGTTTGGTCCTGACTCTGATAATCTTGATAGTTACGACAGCGCCATCAGCAACGGAACTGGTTTTGTTTCACTTGAAATGGACAGTTGGAGACAAACAATGGTAGCGATTTCGAGTAAAAATCTAAAGCACATCCTTACTGCATGCGCAAAAGCTATTGCAGAAAATGATTTGCTAATGGCACAATGGTTGATGGACGAATTACGGCAGATGGTTTCCGTTTCTGGCGAACCGATTCAAAGATTGGGAGCATACATGTTGGAAGGACTCATTGCACGATTGTCTGCGTCCGGGAGTTCAATCTACAAATCTCTAAGATGTAAAGAACCGGAAAGTACCGAACTTCTCTCTTACATGAACATACTTTATGAGGTTTGCCCTTACTTCAAATTTGGATACATGTCTGCAAATGGAGCCATAGCAGAAGCCATGAAAAATGAAGTAAGGGTTCATATAATCGATTTCCAAATTGCTCAAGGAAGCCAATGGATTTCGTTGATTCAAGCTTTTGCAGCTAGGCCCGGTGGGCCGCCGCACATCCGCATTACAGGTATCGATGATTCGACATCAGCTTATGCACGTGGAGGTGGACTACATATAGTTGAAAAGAGATTATCAAAGCTTGCTCAGCATTTCAAGGTGCCATTTCAATTTCATGCTGCAGCTATCTCAGGTTGCGATGTCCAACTACATAACCTCGGAGTTCGGCCGGGGGAAGCTCTGGCAGTAAATTTTGCATTCATGCTACATCACATGCCAGACGAGAGTGTCAGCACTCAGAATCATCGAGACAGGCTCTTAAGATTGGTTAAGAGCCTATCACCGAAAGTCGTGACGCTTGTTGAGCAAGAATCTAACACAAACACTGCTGCATTCTTTCCGCGTTTTCTCGAAACTATGGACTATTACACAGCAATGTTCGAGTCAATAGACGTGACTCTTCCGAGAGAACATAAAGAGAGGATCAATGTTGAGCAGCATTGTTTGGCAAGAGACTTAGTTAACATCATAGCTTGTGAAGGGGTCGAGAGAGTGGAACGACACGAGTTGCTTGGGAAGTGGAGGTCGAGATTCGCAATGGCTGGTTTCACTCCTTACCCTTTGAGTTCTTTGGTGAATGGTACCATAAAGAAATTGCTTGAGAACTATAGTGATAGATATAGACTTGAAGAGAGAGACGGAGCTTTATATCTTGGTTGGATGAATAGAGATTTGGTTGCTTCTTGTGCTTGGAAATGA 1632 0.4363 MQASERHRSMSMYYQPLQQIESYCLPQYRNLNHQLYNNDGGNGTHFSAPNSSDFYCTLESSSAAGSFAVYNSPSTVSFSTNDSPMSQQDCQTCPQDRYHSPDDTYDSPMSGSCVTEDLSSFKHKLRELENVMFGPDSDNLDSYDSAISNGTGFVSLEMDSWRQTMVAISSKNLKHILTACAKAIAENDLLMAQWLMDELRQMVSVSGEPIQRLGAYMLEGLIARLSASGSSIYKSLRCKEPESTELLSYMNILYEVCPYFKFGYMSANGAIAEAMKNEVRVHIIDFQIAQGSQWISLIQAFAARPGGPPHIRITGIDDSTSAYARGGGLHIVEKRLSKLAQHFKVPFQFHAAAISGCDVQLHNLGVRPGEALAVNFAFMLHHMPDESVSTQNHRDRLLRLVKSLSPKVVTLVEQESNTNTAAFFPRFLETMDYYTAMFESIDVTLPREHKERINVEQHCLARDLVNIIACEGVERVERHELLGKWRSRFAMAGFTPYPLSSLVNGTIKKLLENYSDRYRLEERDGALYLGWMNRDLVASCAWK 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Vivi7g02460 543 ProSiteProfiles GRAS family profile. 164 543 IPR005202 -
Vivi7g02460 543 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 138 537 IPR005202 -
Vivi7g02460 543 Pfam GRAS domain family 173 543 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Vivi7g02460 Vivi-Chr7 88456897 88460135 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Vivi7g02460 12 543 GRAS Transcription Factor Family AT5G48150 66.543 0.0 705
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Vivi7g02460 GRAS 1.2e-136 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Vivi7g02460 - - gmx:100808300 984.556